Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AC103705.1-201ENST00000619013 241 ntBASIC2.56□□□□□ -2
PTPN3P26045 RMST_7.1-201ENST00000621935 268 ntBASIC2.56□□□□□ -2
PTPN3P26045 AC244517.12-201ENST00000623581 663 ntBASIC2.56□□□□□ -2
PTPN3P26045 AC138627.2-201ENST00000624202 601 ntBASIC2.56□□□□□ -2
PTPN3P26045 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.56□□□□□ -2
PTPN3P26045 AC121333.1-201ENST00000567488 2709 ntBASIC2.55□□□□□ -2
PTPN3P26045 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.55□□□□□ -2
PTPN3P26045 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PTPN3P26045 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PTPN3P26045 RNA5SP456-201ENST00000364002 114 ntBASIC2.55□□□□□ -2
PTPN3P26045 RNU6-1090P-201ENST00000364065 94 ntBASIC2.55□□□□□ -2
PTPN3P26045 U3.12-201ENST00000364498 214 ntBASIC2.55□□□□□ -2
PTPN3P26045 RNU6-1303P-201ENST00000364841 107 ntBASIC2.55□□□□□ -2
PTPN3P26045 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
PTPN3P26045 MIR634-201ENST00000385208 97 ntBASIC2.55□□□□□ -2
PTPN3P26045 SNORD37.1-201ENST00000390968 65 ntBASIC2.55□□□□□ -2
PTPN3P26045 AL162578.1-201ENST00000406202 378 ntBASIC2.55□□□□□ -2
PTPN3P26045 HMGN2P35-201ENST00000412164 270 ntBASIC2.55□□□□□ -2
PTPN3P26045 MTND3P16-201ENST00000452205 344 ntBASIC2.55□□□□□ -2
PTPN3P26045 AL109933.2-201ENST00000452651 260 ntBASIC2.55□□□□□ -2
PTPN3P26045 RNU6-1208P-201ENST00000459588 107 ntBASIC2.55□□□□□ -2
PTPN3P26045 RPS29P25-201ENST00000481709 171 ntBASIC2.55□□□□□ -2
PTPN3P26045 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.55□□□□□ -2
PTPN3P26045 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.55□□□□□ -2
PTPN3P26045 RNA5SP320-201ENST00000516263 124 ntBASIC2.55□□□□□ -2
PTPN3P26045 RNU6-826P-201ENST00000516827 104 ntBASIC2.55□□□□□ -2
PTPN3P26045 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.55□□□□□ -2
PTPN3P26045 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.55□□□□□ -2
PTPN3P26045 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PTPN3P26045 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.55□□□□□ -2
PTPN3P26045 AC027514.1-201ENST00000588561 1603 ntBASIC2.55□□□□□ -2
PTPN3P26045 Z82243.1-201ENST00000609432 473 ntBASIC2.55□□□□□ -2
PTPN3P26045 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PTPN3P26045 AC092794.1-201ENST00000612734 582 ntBASIC2.55□□□□□ -2
PTPN3P26045 AC026585.1-201ENST00000619582 524 ntBASIC2.55□□□□□ -2
PTPN3P26045 OR4G1P-203ENST00000641984 1631 ntBASIC2.55□□□□□ -2
PTPN3P26045 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.54□□□□□ -2
PTPN3P26045 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
PTPN3P26045 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.54□□□□□ -2
PTPN3P26045 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PTPN3P26045 AC080100.1-201ENST00000624239 5356 ntBASIC2.54□□□□□ -2
PTPN3P26045 Y_RNA.38-201ENST00000362617 102 ntBASIC2.54□□□□□ -2
PTPN3P26045 Y_RNA.89-201ENST00000363031 102 ntBASIC2.54□□□□□ -2
PTPN3P26045 Y_RNA.167-201ENST00000363735 109 ntBASIC2.54□□□□□ -2
PTPN3P26045 RNU6-266P-201ENST00000364225 107 ntBASIC2.54□□□□□ -2
PTPN3P26045 RNU6-522P-201ENST00000364497 107 ntBASIC2.54□□□□□ -2
PTPN3P26045 RNU6-534P-201ENST00000364877 106 ntBASIC2.54□□□□□ -2
PTPN3P26045 RNU4-66P-201ENST00000365199 138 ntBASIC2.54□□□□□ -2
PTPN3P26045 MIR27B-201ENST00000385129 97 ntBASIC2.54□□□□□ -2
PTPN3P26045 AC097463.2-201ENST00000421074 142 ntBASIC2.54□□□□□ -2
PTPN3P26045 SUMO1P4-201ENST00000429430 302 ntBASIC2.54□□□□□ -2
PTPN3P26045 RPS12P2-201ENST00000439728 269 ntBASIC2.54□□□□□ -2
PTPN3P26045 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.54□□□□□ -2
PTPN3P26045 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.54□□□□□ -2
PTPN3P26045 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.54□□□□□ -2
PTPN3P26045 AP000705.1-201ENST00000454567 350 ntBASIC2.54□□□□□ -2
PTPN3P26045 AP001486.1-201ENST00000463339 476 ntBASIC2.54□□□□□ -2
PTPN3P26045 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.54□□□□□ -2
PTPN3P26045 AL049873.1-201ENST00000480540 376 ntBASIC2.54□□□□□ -2
PTPN3P26045 RPS27P27-201ENST00000498779 255 ntBASIC2.54□□□□□ -2
PTPN3P26045 RN7SKP24-201ENST00000515888 284 ntBASIC2.54□□□□□ -2
PTPN3P26045 RNU6-189P-201ENST00000516120 101 ntBASIC2.54□□□□□ -2
PTPN3P26045 RNU5B-3P-201ENST00000516601 115 ntBASIC2.54□□□□□ -2
PTPN3P26045 AC069113.1-201ENST00000517763 267 ntBASIC2.54□□□□□ -2
PTPN3P26045 COPS8P3-201ENST00000526024 482 ntBASIC2.54□□□□□ -2
PTPN3P26045 AC023050.3-201ENST00000541142 333 ntBASIC2.54□□□□□ -2
PTPN3P26045 AL118558.2-201ENST00000556294 238 ntBASIC2.54□□□□□ -2
PTPN3P26045 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.54□□□□□ -2
PTPN3P26045 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.54□□□□□ -2
PTPN3P26045 AC009163.5-201ENST00000575421 637 ntBASIC2.54□□□□□ -2
PTPN3P26045 MIR3670-2-201ENST00000582974 65 ntBASIC2.54□□□□□ -2
PTPN3P26045 MIR3670-1-201ENST00000584160 65 ntBASIC2.54□□□□□ -2
PTPN3P26045 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.54□□□□□ -2
PTPN3P26045 MIR3670-3-201ENST00000584855 65 ntBASIC2.54□□□□□ -2
PTPN3P26045 AL356575.1-201ENST00000603008 283 ntBASIC2.54□□□□□ -2
PTPN3P26045 AC096772.1-201ENST00000609146 564 ntBASIC2.54□□□□□ -2
PTPN3P26045 MIR3670-4-201ENST00000612260 65 ntBASIC2.54□□□□□ -2
PTPN3P26045 HMGB1P24-202ENST00000615653 685 ntBASIC2.54□□□□□ -2
PTPN3P26045 AC024581.2-201ENST00000619986 252 ntBASIC2.54□□□□□ -2
PTPN3P26045 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.54□□□□□ -2
PTPN3P26045 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.54□□□□□ -2
PTPN3P26045 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.54□□□□□ -2
PTPN3P26045 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.54□□□□□ -2
PTPN3P26045 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.54□□□□□ -2
PTPN3P26045 Z75746.1-201ENST00000440243 2080 ntBASIC2.53□□□□□ -2
PTPN3P26045 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.53□□□□□ -2
PTPN3P26045 SNORA25.6-201ENST00000364121 118 ntBASIC2.53□□□□□ -2
PTPN3P26045 Y_RNA.256-201ENST00000364594 104 ntBASIC2.53□□□□□ -2
PTPN3P26045 DEFA7P-201ENST00000382676 285 ntBASIC2.53□□□□□ -2
PTPN3P26045 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.53□□□□□ -2
PTPN3P26045 MIR1277-201ENST00000408536 78 ntBASIC2.53□□□□□ -2
PTPN3P26045 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.53□□□□□ -2
PTPN3P26045 RNA5SP118-201ENST00000410385 109 ntBASIC2.53□□□□□ -2
PTPN3P26045 POLHP1-201ENST00000411806 470 ntBASIC2.53□□□□□ -2
PTPN3P26045 OR9R1P-201ENST00000412200 877 ntBASIC2.53□□□□□ -2
PTPN3P26045 AL096701.2-201ENST00000416920 238 ntBASIC2.53□□□□□ -2
PTPN3P26045 ERLEC1P1-201ENST00000433806 578 ntBASIC2.53□□□□□ -2
PTPN3P26045 MED28P2-201ENST00000475771 317 ntBASIC2.53□□□□□ -2
PTPN3P26045 RPL7P43-201ENST00000478876 753 ntBASIC2.53□□□□□ -2
PTPN3P26045 RPL21P99-201ENST00000480369 423 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms