Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AL138885.1-201ENST00000405921 675 ntBASIC3.55□□□□□ -1.84
XPAP23025 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.55□□□□□ -1.84
XPAP23025 MTCYBP10-201ENST00000424905 650 ntBASIC3.55□□□□□ -1.84
XPAP23025 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
XPAP23025 AC079354.2-201ENST00000453523 154 ntBASIC3.55□□□□□ -1.84
XPAP23025 AC128713.1-201ENST00000471495 306 ntBASIC3.55□□□□□ -1.84
XPAP23025 RN7SL293P-201ENST00000481765 281 ntBASIC3.55□□□□□ -1.84
XPAP23025 AC006483.1-201ENST00000487308 313 ntBASIC3.55□□□□□ -1.84
XPAP23025 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.55□□□□□ -1.84
XPAP23025 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.55□□□□□ -1.84
XPAP23025 RNU6-579P-201ENST00000516879 102 ntBASIC3.55□□□□□ -1.84
XPAP23025 SNORA31.18-201ENST00000517043 134 ntBASIC3.55□□□□□ -1.84
XPAP23025 AP004607.1-201ENST00000524456 203 ntBASIC3.55□□□□□ -1.84
XPAP23025 AP000867.2-201ENST00000532468 320 ntBASIC3.55□□□□□ -1.84
XPAP23025 HIGD1AP1-201ENST00000550979 275 ntBASIC3.55□□□□□ -1.84
XPAP23025 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.55□□□□□ -1.84
XPAP23025 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.55□□□□□ -1.84
XPAP23025 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.55□□□□□ -1.84
XPAP23025 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.55□□□□□ -1.84
XPAP23025 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.55□□□□□ -1.84
XPAP23025 AC024153.1-201ENST00000603103 365 ntBASIC3.55□□□□□ -1.84
XPAP23025 AC009318.2-201ENST00000610917 651 ntBASIC3.55□□□□□ -1.84
XPAP23025 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.55□□□□□ -1.84
XPAP23025 MTND5P9-201ENST00000503854 1755 ntBASIC3.55□□□□□ -1.84
XPAP23025 PWAR6-201ENST00000552334 4618 ntBASIC3.55□□□□□ -1.84
XPAP23025 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.55□□□□□ -1.84
XPAP23025 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
XPAP23025 ZNF299P-201ENST00000406845 1804 ntBASIC3.54□□□□□ -1.84
XPAP23025 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
XPAP23025 RNU6-799P-201ENST00000363567 107 ntBASIC3.54□□□□□ -1.84
XPAP23025 Y_RNA.153-201ENST00000363615 91 ntBASIC3.54□□□□□ -1.84
XPAP23025 RNA5SP139-201ENST00000364340 117 ntBASIC3.54□□□□□ -1.84
XPAP23025 RNU6-1027P-201ENST00000383998 107 ntBASIC3.54□□□□□ -1.84
XPAP23025 SNORA48.8-201ENST00000391324 134 ntBASIC3.54□□□□□ -1.84
XPAP23025 U3.39-201ENST00000408569 239 ntBASIC3.54□□□□□ -1.84
XPAP23025 DBIP2-201ENST00000419076 262 ntBASIC3.54□□□□□ -1.84
XPAP23025 EIF4EP2-201ENST00000422816 654 ntBASIC3.54□□□□□ -1.84
XPAP23025 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.54□□□□□ -1.84
XPAP23025 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.54□□□□□ -1.84
XPAP23025 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.54□□□□□ -1.84
XPAP23025 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.54□□□□□ -1.84
XPAP23025 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.54□□□□□ -1.84
XPAP23025 AL031183.1-201ENST00000457667 207 ntBASIC3.54□□□□□ -1.84
XPAP23025 RPL21P10-201ENST00000463521 490 ntBASIC3.54□□□□□ -1.84
XPAP23025 AC025518.1-201ENST00000479856 347 ntBASIC3.54□□□□□ -1.84
XPAP23025 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.54□□□□□ -1.84
XPAP23025 RNU6-581P-201ENST00000516214 105 ntBASIC3.54□□□□□ -1.84
XPAP23025 RNU6-1231P-201ENST00000517185 103 ntBASIC3.54□□□□□ -1.84
XPAP23025 COX6CP5-201ENST00000527162 228 ntBASIC3.54□□□□□ -1.84
XPAP23025 AC023442.1-201ENST00000531247 422 ntBASIC3.54□□□□□ -1.84
XPAP23025 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.54□□□□□ -1.84
XPAP23025 AC113195.1-201ENST00000579952 141 ntBASIC3.54□□□□□ -1.84
XPAP23025 AL133393.1-201ENST00000603277 287 ntBASIC3.54□□□□□ -1.84
XPAP23025 AC092628.2-201ENST00000622492 339 ntBASIC3.54□□□□□ -1.84
XPAP23025 AC138305.3-201ENST00000624988 240 ntBASIC3.54□□□□□ -1.84
XPAP23025 MIR4272-201ENST00000635924 64 ntBASIC3.54□□□□□ -1.84
XPAP23025 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
XPAP23025 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.53□□□□□ -1.84
XPAP23025 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
XPAP23025 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
XPAP23025 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
XPAP23025 MAPK10-322ENST00000641485 4530 ntBASIC3.53□□□□□ -1.84
XPAP23025 Y_RNA.39-201ENST00000362620 98 ntBASIC3.53□□□□□ -1.84
XPAP23025 RNU6-227P-201ENST00000362865 103 ntBASIC3.53□□□□□ -1.84
XPAP23025 RNU1-18P-201ENST00000363062 164 ntBASIC3.53□□□□□ -1.84
XPAP23025 Y_RNA.123-201ENST00000363338 102 ntBASIC3.53□□□□□ -1.84
XPAP23025 RNU6-527P-201ENST00000363425 104 ntBASIC3.53□□□□□ -1.84
XPAP23025 RNU6-595P-201ENST00000363944 107 ntBASIC3.53□□□□□ -1.84
XPAP23025 Y_RNA.389-201ENST00000383924 113 ntBASIC3.53□□□□□ -1.84
XPAP23025 Y_RNA.455-201ENST00000384230 98 ntBASIC3.53□□□□□ -1.84
XPAP23025 RNA5SP252-201ENST00000391131 119 ntBASIC3.53□□□□□ -1.84
XPAP23025 RPL23AP82-202ENST00000427528 469 ntBASIC3.53□□□□□ -1.84
XPAP23025 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.53□□□□□ -1.84
XPAP23025 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.53□□□□□ -1.84
XPAP23025 RPL26P9-201ENST00000457466 433 ntBASIC3.53□□□□□ -1.84
XPAP23025 snoU13.28-201ENST00000459235 104 ntBASIC3.53□□□□□ -1.84
XPAP23025 RNU7-169P-201ENST00000459456 61 ntBASIC3.53□□□□□ -1.84
XPAP23025 RN7SL93P-201ENST00000463035 293 ntBASIC3.53□□□□□ -1.84
XPAP23025 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.53□□□□□ -1.84
XPAP23025 GNAI2P1-201ENST00000541815 315 ntBASIC3.53□□□□□ -1.84
XPAP23025 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.53□□□□□ -1.84
XPAP23025 AC008269.2-201ENST00000561915 1105 ntBASIC3.53□□□□□ -1.84
XPAP23025 MIR5701-3-201ENST00000578890 82 ntBASIC3.53□□□□□ -1.84
XPAP23025 MIR5701-1-201ENST00000585138 82 ntBASIC3.53□□□□□ -1.84
XPAP23025 HMGN2P15-201ENST00000585707 270 ntBASIC3.53□□□□□ -1.84
XPAP23025 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.53□□□□□ -1.84
XPAP23025 MIR5701-2-201ENST00000615634 82 ntBASIC3.53□□□□□ -1.84
XPAP23025 AC241585.2-209ENST00000638217 143 ntBASIC3.53□□□□□ -1.84
XPAP23025 TNPO1P3-201ENST00000436471 2662 ntBASIC3.53□□□□□ -1.84
XPAP23025 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
XPAP23025 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
XPAP23025 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
XPAP23025 AC008669.1-201ENST00000565823 2178 ntBASIC3.52□□□□□ -1.85
XPAP23025 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
XPAP23025 RNA5SP72-201ENST00000364442 117 ntBASIC3.52□□□□□ -1.85
XPAP23025 RNU4-42P-201ENST00000364738 142 ntBASIC3.52□□□□□ -1.85
XPAP23025 RNU6-463P-201ENST00000384340 107 ntBASIC3.52□□□□□ -1.85
XPAP23025 SNORD116-20-201ENST00000384529 92 ntBASIC3.52□□□□□ -1.85
XPAP23025 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.52□□□□□ -1.85
XPAP23025 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms