Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC090515.1-201ENST00000465295 476 ntBASIC2.04□□□□□ -2.08
XRCC1P18887 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.04□□□□□ -2.08
XRCC1P18887 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.04□□□□□ -2.08
XRCC1P18887 RNU1-86P-201ENST00000516108 154 ntBASIC2.04□□□□□ -2.08
XRCC1P18887 RNU1-107P-201ENST00000516617 154 ntBASIC2.04□□□□□ -2.08
XRCC1P18887 SNORA43.2-201ENST00000516652 128 ntBASIC2.04□□□□□ -2.08
XRCC1P18887 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.04□□□□□ -2.08
XRCC1P18887 AL356057.1-201ENST00000533798 831 ntBASIC2.04□□□□□ -2.08
XRCC1P18887 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.04□□□□□ -2.08
XRCC1P18887 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.04□□□□□ -2.08
XRCC1P18887 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.04□□□□□ -2.08
XRCC1P18887 AC002984.1-201ENST00000591692 448 ntBASIC2.04□□□□□ -2.08
XRCC1P18887 AC009233.1-201ENST00000616477 371 ntBASIC2.04□□□□□ -2.08
XRCC1P18887 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.04□□□□□ -2.08
XRCC1P18887 AC131280.1-202ENST00000624067 4211 ntBASIC2.04□□□□□ -2.08
XRCC1P18887 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
XRCC1P18887 RNU6-1120P-201ENST00000362988 108 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 RNU6-1029P-201ENST00000384109 107 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 RNU6-348P-201ENST00000384386 107 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 RNU1-57P-201ENST00000384491 166 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 MIR95-201ENST00000385072 81 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 SNORD23.1-201ENST00000408212 104 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 OR9R1P-201ENST00000412200 877 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.03□□□□□ -2.08
XRCC1P18887 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.03□□□□□ -2.08
XRCC1P18887 PGBD4P6-201ENST00000421501 610 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.03□□□□□ -2.08
XRCC1P18887 AC000111.3-201ENST00000433478 193 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 AL161788.1-201ENST00000441805 169 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 GPM6BP3-201ENST00000442797 145 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 RPL31P3-201ENST00000458430 332 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 KLF3P2-201ENST00000465138 268 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 UBL5P3-201ENST00000475112 231 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.03□□□□□ -2.08
XRCC1P18887 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
XRCC1P18887 AC010493.1-201ENST00000513479 292 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 AC105417.1-201ENST00000514691 285 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 SNORA25.11-201ENST00000515935 105 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 MIR514B-201ENST00000516774 80 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 MTND2P38-201ENST00000522536 667 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.03□□□□□ -2.08
XRCC1P18887 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.03□□□□□ -2.08
XRCC1P18887 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.03□□□□□ -2.08
XRCC1P18887 AL138976.2-201ENST00000563989 694 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 AC104984.5-201ENST00000586878 94 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 AC073539.2-201ENST00000597113 165 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 AC073410.2-201ENST00000603240 332 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 AC093788.1-201ENST00000609356 927 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.03□□□□□ -2.08
XRCC1P18887 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 AC008121.3-201ENST00000618726 433 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 RMST_7.1-201ENST00000621935 268 ntBASIC2.03□□□□□ -2.08
XRCC1P18887 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
XRCC1P18887 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.03□□□□□ -2.08
XRCC1P18887 RNU1-72P-201ENST00000362976 153 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 SNORA75-201ENST00000384158 137 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 RNU6-622P-201ENST00000384272 103 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 SNORD116-20-201ENST00000384529 92 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 RN7SKP158-201ENST00000410453 326 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 AL356379.1-201ENST00000414105 126 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.02□□□□□ -2.09
XRCC1P18887 AC074117.2-201ENST00000417130 397 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.02□□□□□ -2.09
XRCC1P18887 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.02□□□□□ -2.09
XRCC1P18887 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.02□□□□□ -2.09
XRCC1P18887 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.02□□□□□ -2.09
XRCC1P18887 AC124916.1-201ENST00000444020 547 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.02□□□□□ -2.09
XRCC1P18887 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.02□□□□□ -2.09
XRCC1P18887 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.02□□□□□ -2.09
XRCC1P18887 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.02□□□□□ -2.09
XRCC1P18887 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.02□□□□□ -2.09
XRCC1P18887 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.02□□□□□ -2.09
XRCC1P18887 MTND3P25-201ENST00000509243 135 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 SNORA31.23-201ENST00000517219 133 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.02□□□□□ -2.09
XRCC1P18887 CYCSP26-201ENST00000534107 320 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 BNIP3P6-201ENST00000549284 499 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.02□□□□□ -2.09
XRCC1P18887 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 MIR4703-201ENST00000577728 79 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 AC110760.3-201ENST00000598794 467 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 AL158827.2-201ENST00000602494 330 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 AL355297.2-201ENST00000604792 129 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 SNORD14A-201ENST00000606526 91 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 uc_338.15-201ENST00000615470 191 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 AC005609.4-201ENST00000625071 447 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 AL691447.3-201ENST00000635020 330 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
XRCC1P18887 KPNA2P1-201ENST00000458289 1591 ntBASIC2.02□□□□□ -2.09
XRCC1P18887 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
XRCC1P18887 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
XRCC1P18887 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
XRCC1P18887 AL359851.1-201ENST00000569460 4997 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
XRCC1P18887 RNU6-529P-201ENST00000363383 104 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 SNORA3A-201ENST00000364113 130 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 RNU6-715P-201ENST00000365204 103 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 Y_RNA.553-201ENST00000384670 102 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 RNU2-3P-201ENST00000410144 191 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms