Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AL049830.2-201ENST00000480072 201 ntBASIC3.32□□□□□ -1.88
RHOP08100 RPL23AP94-201ENST00000512518 302 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-1282P-201ENST00000516735 96 ntBASIC3.32□□□□□ -1.88
RHOP08100 SNORD116.3-201ENST00000517176 78 ntBASIC3.32□□□□□ -1.88
RHOP08100 AC109479.2-201ENST00000517842 174 ntBASIC3.32□□□□□ -1.88
RHOP08100 GNAI2P1-201ENST00000541815 315 ntBASIC3.32□□□□□ -1.88
RHOP08100 AL117187.1-201ENST00000555482 181 ntBASIC3.32□□□□□ -1.88
RHOP08100 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.32□□□□□ -1.88
RHOP08100 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.32□□□□□ -1.88
RHOP08100 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.32□□□□□ -1.88
RHOP08100 MIR4513-201ENST00000581077 86 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-6P-201ENST00000606623 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.32□□□□□ -1.88
RHOP08100 uc_338.25-201ENST00000613756 156 ntBASIC3.32□□□□□ -1.88
RHOP08100 AC092628.2-201ENST00000622492 339 ntBASIC3.32□□□□□ -1.88
RHOP08100 AC138627.2-201ENST00000624202 601 ntBASIC3.32□□□□□ -1.88
RHOP08100 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RHOP08100 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RHOP08100 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
RHOP08100 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RHOP08100 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RHOP08100 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RHOP08100 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.31□□□□□ -1.88
RHOP08100 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RHOP08100 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RHOP08100 RNU6-217P-201ENST00000384164 104 ntBASIC3.31□□□□□ -1.88
RHOP08100 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.31□□□□□ -1.88
RHOP08100 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.31□□□□□ -1.88
RHOP08100 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.31□□□□□ -1.88
RHOP08100 AC107083.1-201ENST00000439643 279 ntBASIC3.31□□□□□ -1.88
RHOP08100 AC099799.1-201ENST00000439809 192 ntBASIC3.31□□□□□ -1.88
RHOP08100 HMGB3P8-201ENST00000449709 577 ntBASIC3.31□□□□□ -1.88
RHOP08100 RPL23AP45-201ENST00000476406 468 ntBASIC3.31□□□□□ -1.88
RHOP08100 ACA59.1-201ENST00000515966 143 ntBASIC3.31□□□□□ -1.88
RHOP08100 Y_RNA.661-201ENST00000516003 99 ntBASIC3.31□□□□□ -1.88
RHOP08100 RNU6-475P-201ENST00000516073 104 ntBASIC3.31□□□□□ -1.88
RHOP08100 RNU6-572P-201ENST00000516724 80 ntBASIC3.31□□□□□ -1.88
RHOP08100 RNU6-703P-201ENST00000516946 107 ntBASIC3.31□□□□□ -1.88
RHOP08100 AC009812.2-201ENST00000517657 457 ntBASIC3.31□□□□□ -1.88
RHOP08100 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.31□□□□□ -1.88
RHOP08100 MIR4298-201ENST00000584380 73 ntBASIC3.31□□□□□ -1.88
RHOP08100 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RHOP08100 MIR7106-201ENST00000612419 65 ntBASIC3.31□□□□□ -1.88
RHOP08100 AL161629.2-201ENST00000615347 275 ntBASIC3.31□□□□□ -1.88
RHOP08100 AC027309.3-201ENST00000623419 351 ntBASIC3.31□□□□□ -1.88
RHOP08100 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RHOP08100 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.31□□□□□ -1.88
RHOP08100 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RHOP08100 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.3□□□□□ -1.88
RHOP08100 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RHOP08100 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.3□□□□□ -1.88
RHOP08100 CUL1P1-201ENST00000509510 2425 ntBASIC3.3□□□□□ -1.88
RHOP08100 U8.8-201ENST00000365399 135 ntBASIC3.3□□□□□ -1.88
RHOP08100 RNU6-463P-201ENST00000384340 107 ntBASIC3.3□□□□□ -1.88
RHOP08100 RNU6-933P-201ENST00000384424 107 ntBASIC3.3□□□□□ -1.88
RHOP08100 RNU6-790P-201ENST00000384479 105 ntBASIC3.3□□□□□ -1.88
RHOP08100 AL356057.3-201ENST00000402607 340 ntBASIC3.3□□□□□ -1.88
RHOP08100 AL591034.2-201ENST00000402839 359 ntBASIC3.3□□□□□ -1.88
RHOP08100 AL513475.1-201ENST00000406602 315 ntBASIC3.3□□□□□ -1.88
RHOP08100 PGBD4P6-201ENST00000421501 610 ntBASIC3.3□□□□□ -1.88
RHOP08100 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.3□□□□□ -1.88
RHOP08100 TOMM20P4-201ENST00000427861 435 ntBASIC3.3□□□□□ -1.88
RHOP08100 AL512844.2-201ENST00000433990 593 ntBASIC3.3□□□□□ -1.88
RHOP08100 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.3□□□□□ -1.88
RHOP08100 RN7SL330P-201ENST00000469709 307 ntBASIC3.3□□□□□ -1.88
RHOP08100 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.3□□□□□ -1.88
RHOP08100 RNU6-264P-201ENST00000517134 104 ntBASIC3.3□□□□□ -1.88
RHOP08100 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.3□□□□□ -1.88
RHOP08100 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.3□□□□□ -1.88
RHOP08100 AC008121.1-201ENST00000603244 268 ntBASIC3.3□□□□□ -1.88
RHOP08100 AC009314.1-201ENST00000603871 304 ntBASIC3.3□□□□□ -1.88
RHOP08100 AL355598.1-201ENST00000604169 202 ntBASIC3.3□□□□□ -1.88
RHOP08100 AC018889.1-201ENST00000605372 397 ntBASIC3.3□□□□□ -1.88
RHOP08100 AC006157.1-201ENST00000611750 366 ntBASIC3.3□□□□□ -1.88
RHOP08100 AC068831.7-201ENST00000616954 363 ntBASIC3.3□□□□□ -1.88
RHOP08100 AC002076.2-201ENST00000617362 122 ntBASIC3.3□□□□□ -1.88
RHOP08100 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RHOP08100 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RHOP08100 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RHOP08100 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RHOP08100 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.29□□□□□ -1.88
RHOP08100 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.29□□□□□ -1.88
RHOP08100 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RHOP08100 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.29□□□□□ -1.88
RHOP08100 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RHOP08100 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.29□□□□□ -1.88
RHOP08100 RNU6-140P-201ENST00000384566 108 ntBASIC3.29□□□□□ -1.88
RHOP08100 BX276092.3-201ENST00000424182 230 ntBASIC3.29□□□□□ -1.88
RHOP08100 AC007560.1-201ENST00000426912 237 ntBASIC3.29□□□□□ -1.88
RHOP08100 AL160004.2-201ENST00000432935 350 ntBASIC3.29□□□□□ -1.88
RHOP08100 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.29□□□□□ -1.88
RHOP08100 CST9LP2-201ENST00000437612 320 ntBASIC3.29□□□□□ -1.88
RHOP08100 AL031274.1-201ENST00000450334 232 ntBASIC3.29□□□□□ -1.88
RHOP08100 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RHOP08100 RPL12P25-201ENST00000455592 494 ntBASIC3.29□□□□□ -1.88
RHOP08100 AC068781.1-201ENST00000488231 618 ntBASIC3.29□□□□□ -1.88
RHOP08100 RNU6-120P-201ENST00000516077 103 ntBASIC3.29□□□□□ -1.88
RHOP08100 RNU6-764P-201ENST00000516396 105 ntBASIC3.29□□□□□ -1.88
RHOP08100 MIR2276-201ENST00000516886 89 ntBASIC3.29□□□□□ -1.88
RHOP08100 H3F3AP1-201ENST00000559984 334 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms