Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RNU6-434P-201ENST00000384376 107 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 SNORA80E-201ENST00000384744 137 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 MIR524-201ENST00000385242 87 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 CYCSP48-201ENST00000417124 323 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.27□□□□□ -2.05
MT-ND1P03886 PGBD4P6-201ENST00000421501 610 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.27□□□□□ -2.05
MT-ND1P03886 AL121601.2-201ENST00000438019 707 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 PRPS1P1-201ENST00000445305 876 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 NDUFB1P2-201ENST00000449477 176 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 snoU109.2-201ENST00000459316 135 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 DYNLL1P5-201ENST00000467158 270 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 AC087884.1-201ENST00000469738 328 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 AC097462.2-201ENST00000504623 481 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.27□□□□□ -2.05
MT-ND1P03886 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.27□□□□□ -2.05
MT-ND1P03886 RNU6-581P-201ENST00000516214 105 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 MIR892C-201ENST00000516410 77 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.27□□□□□ -2.05
MT-ND1P03886 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.27□□□□□ -2.05
MT-ND1P03886 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.27□□□□□ -2.05
MT-ND1P03886 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.27□□□□□ -2.05
MT-ND1P03886 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.27□□□□□ -2.05
MT-ND1P03886 LINC00933-203ENST00000559812 219 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.27□□□□□ -2.05
MT-ND1P03886 AC104458.1-201ENST00000608243 463 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 AC135507.2-201ENST00000612443 309 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 AC011890.2-201ENST00000613393 294 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 RMST_4.1-201ENST00000616886 107 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 AC002553.4-201ENST00000616896 331 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 MIR6134-201ENST00000617606 109 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 U6.42-201ENST00000618440 107 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 AL031601.2-202ENST00000622650 282 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 CDC27P3-201ENST00000635418 1910 ntBASIC2.27□□□□□ -2.05
MT-ND1P03886 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
MT-ND1P03886 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.26□□□□□ -2.05
MT-ND1P03886 RNU6-1280P-201ENST00000365211 107 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 MIR10A-201ENST00000385043 110 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 MIR27B-201ENST00000385129 97 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
MT-ND1P03886 RNU6-332P-201ENST00000391193 108 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 Y_RNA.615-201ENST00000410769 117 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.26□□□□□ -2.05
MT-ND1P03886 SRIP2-201ENST00000428470 166 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 AL627311.1-201ENST00000431514 115 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.26□□□□□ -2.05
MT-ND1P03886 AC092473.1-201ENST00000441098 221 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 AP001324.2-201ENST00000461163 319 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 RPL38P4-201ENST00000502376 214 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.26□□□□□ -2.05
MT-ND1P03886 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.26□□□□□ -2.05
MT-ND1P03886 AC074344.1-201ENST00000512823 224 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.26□□□□□ -2.05
MT-ND1P03886 SNORA25.17-201ENST00000517184 124 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 AP005902.1-201ENST00000521358 186 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 CENPUP1-201ENST00000526649 1202 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 AC087241.2-201ENST00000535801 324 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 AC090115.3-201ENST00000553218 849 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 GTF3AP2-201ENST00000557014 266 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.26□□□□□ -2.05
MT-ND1P03886 AC002044.1-201ENST00000606707 158 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.26□□□□□ -2.05
MT-ND1P03886 AC092608.2-201ENST00000624427 218 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 MIR3662-201ENST00000637030 95 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 ZNF720P1-201ENST00000562403 1939 ntBASIC2.26□□□□□ -2.05
MT-ND1P03886 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
MT-ND1P03886 RNA5SP387-201ENST00000364226 106 ntBASIC2.25□□□□□ -2.05
MT-ND1P03886 Y_RNA.231-201ENST00000364358 102 ntBASIC2.25□□□□□ -2.05
MT-ND1P03886 Y_RNA.333-201ENST00000365274 102 ntBASIC2.25□□□□□ -2.05
MT-ND1P03886 RNU6-1283P-201ENST00000365314 105 ntBASIC2.25□□□□□ -2.05
MT-ND1P03886 RNU2-52P-201ENST00000410680 190 ntBASIC2.25□□□□□ -2.05
MT-ND1P03886 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.25□□□□□ -2.05
MT-ND1P03886 RPL30P16-201ENST00000419341 429 ntBASIC2.25□□□□□ -2.05
MT-ND1P03886 SNRPEP10-201ENST00000420249 274 ntBASIC2.25□□□□□ -2.05
MT-ND1P03886 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.25□□□□□ -2.05
MT-ND1P03886 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.25□□□□□ -2.05
MT-ND1P03886 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.25□□□□□ -2.05
MT-ND1P03886 AC006946.1-201ENST00000429106 328 ntBASIC2.25□□□□□ -2.05
MT-ND1P03886 ARL5AP4-201ENST00000430731 512 ntBASIC2.25□□□□□ -2.05
MT-ND1P03886 RBMX2P4-201ENST00000441256 376 ntBASIC2.25□□□□□ -2.05
MT-ND1P03886 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.25□□□□□ -2.05
MT-ND1P03886 RNU7-167P-201ENST00000459160 62 ntBASIC2.25□□□□□ -2.05
MT-ND1P03886 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.25□□□□□ -2.05
MT-ND1P03886 MRPL42P6-201ENST00000486397 371 ntBASIC2.25□□□□□ -2.05
MT-ND1P03886 MTCYBP18-201ENST00000501056 747 ntBASIC2.25□□□□□ -2.05
MT-ND1P03886 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.25□□□□□ -2.05
MT-ND1P03886 AC107222.1-201ENST00000510899 637 ntBASIC2.25□□□□□ -2.05
MT-ND1P03886 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.25□□□□□ -2.05
MT-ND1P03886 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.25□□□□□ -2.05
MT-ND1P03886 SNORA59B-202ENST00000578183 701 ntBASIC2.25□□□□□ -2.05
MT-ND1P03886 AC092807.2-201ENST00000609367 243 ntBASIC2.25□□□□□ -2.05
MT-ND1P03886 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.25□□□□□ -2.05
MT-ND1P03886 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
MT-ND1P03886 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
MT-ND1P03886 Y_RNA.324-201ENST00000365165 102 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
MT-ND1P03886 RNU6-877P-201ENST00000383868 107 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 SNORA41-201ENST00000384675 132 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 MIR34A-201ENST00000385130 110 ntBASIC2.24□□□□□ -2.05
MT-ND1P03886 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms