Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RNU6-550P-201ENST00000391057 101 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 AL133475.1-201ENST00000404414 305 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 AL590004.2-201ENST00000404787 371 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 AC108667.1-201ENST00000428618 249 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 MTCO3P5-201ENST00000433620 714 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.35□□□□□ -2.03
PDGFBP01127 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.35□□□□□ -2.03
PDGFBP01127 MRPL50P4-201ENST00000446432 475 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 AL118520.1-201ENST00000450770 291 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.35□□□□□ -2.03
PDGFBP01127 AC022364.2-201ENST00000457963 554 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 RPL9P33-201ENST00000484311 566 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
PDGFBP01127 AF213884.2-201ENST00000510417 903 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 AC112206.3-201ENST00000514578 389 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 SNORA25.11-201ENST00000515935 105 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 RNU5B-3P-201ENST00000516601 115 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.35□□□□□ -2.03
PDGFBP01127 OR5AQ1P-201ENST00000527596 927 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 AC004486.1-201ENST00000546846 233 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 BNIP3P6-201ENST00000549284 499 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 MIR548AC-201ENST00000585049 88 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 AC078795.2-201ENST00000602835 1252 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 AL138889.2-201ENST00000603883 242 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 AC087045.1-201ENST00000605856 382 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.35□□□□□ -2.03
PDGFBP01127 AC096772.1-201ENST00000609146 564 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 U6.42-201ENST00000618440 107 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 MIR5739-201ENST00000619803 80 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 AC139792.3-201ENST00000623525 224 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PDGFBP01127 AC016717.2-201ENST00000609089 5141 ntBASIC2.35□□□□□ -2.03
PDGFBP01127 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PDGFBP01127 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PDGFBP01127 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
PDGFBP01127 AL139276.1-201ENST00000311910 1001 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 RNU6-858P-201ENST00000362436 107 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 RNU6-1120P-201ENST00000362988 108 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 Y_RNA.372-201ENST00000365599 102 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 RNU6-166P-201ENST00000384371 107 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 MIR518D-201ENST00000385014 87 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 SNORD37.1-201ENST00000390968 65 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 SNORA26.9-201ENST00000391322 122 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 RN7SKP158-201ENST00000410453 326 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 AC016831.2-201ENST00000417179 352 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.34□□□□□ -2.03
PDGFBP01127 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.34□□□□□ -2.03
PDGFBP01127 MTCO2P19-201ENST00000427513 598 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 AL606489.2-201ENST00000433886 234 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 AC245517.4-201ENST00000448601 281 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 AC027673.1-201ENST00000456245 405 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 RNU7-63P-201ENST00000459054 62 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.34□□□□□ -2.03
PDGFBP01127 RPL36AP21-201ENST00000490372 323 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 RNU6-314P-201ENST00000516574 104 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 Y_RNA.704-201ENST00000516851 102 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.34□□□□□ -2.03
PDGFBP01127 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.34□□□□□ -2.03
PDGFBP01127 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.34□□□□□ -2.03
PDGFBP01127 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.34□□□□□ -2.03
PDGFBP01127 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.34□□□□□ -2.03
PDGFBP01127 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.34□□□□□ -2.03
PDGFBP01127 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.34□□□□□ -2.03
PDGFBP01127 AL138963.2-201ENST00000605137 226 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 MIR6845-201ENST00000613182 61 ntBASIC2.34□□□□□ -2.03
PDGFBP01127 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.34□□□□□ -2.03
PDGFBP01127 MTND5P17-201ENST00000418405 1603 ntBASIC2.34□□□□□ -2.04
PDGFBP01127 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.33□□□□□ -2.04
PDGFBP01127 RNU6-623P-201ENST00000363143 105 ntBASIC2.33□□□□□ -2.04
PDGFBP01127 RNU1-100P-201ENST00000365255 165 ntBASIC2.33□□□□□ -2.04
PDGFBP01127 MIR10A-201ENST00000385043 110 ntBASIC2.33□□□□□ -2.04
PDGFBP01127 RNU6-780P-201ENST00000391030 104 ntBASIC2.33□□□□□ -2.04
PDGFBP01127 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.33□□□□□ -2.04
PDGFBP01127 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PDGFBP01127 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.33□□□□□ -2.04
PDGFBP01127 SRRM1P2-201ENST00000464531 1192 ntBASIC2.33□□□□□ -2.04
PDGFBP01127 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.33□□□□□ -2.04
PDGFBP01127 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.33□□□□□ -2.04
PDGFBP01127 MTND2P33-201ENST00000506452 1031 ntBASIC2.33□□□□□ -2.04
PDGFBP01127 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.33□□□□□ -2.04
PDGFBP01127 MTND3P25-201ENST00000509243 135 ntBASIC2.33□□□□□ -2.04
PDGFBP01127 HMGB3P3-201ENST00000510526 400 ntBASIC2.33□□□□□ -2.04
PDGFBP01127 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.33□□□□□ -2.04
PDGFBP01127 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.33□□□□□ -2.04
PDGFBP01127 SMURF2P1-201ENST00000514992 481 ntBASIC2.33□□□□□ -2.04
PDGFBP01127 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.33□□□□□ -2.04
PDGFBP01127 AC135279.1-201ENST00000543493 504 ntBASIC2.33□□□□□ -2.04
PDGFBP01127 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.33□□□□□ -2.04
PDGFBP01127 AL138976.2-201ENST00000563989 694 ntBASIC2.33□□□□□ -2.04
PDGFBP01127 AC025165.5-201ENST00000602802 578 ntBASIC2.33□□□□□ -2.04
PDGFBP01127 AC008945.2-201ENST00000606056 604 ntBASIC2.33□□□□□ -2.04
PDGFBP01127 SNORD14A-201ENST00000606526 91 ntBASIC2.33□□□□□ -2.04
PDGFBP01127 AC064807.4-201ENST00000607201 407 ntBASIC2.33□□□□□ -2.04
PDGFBP01127 AF250324.2-201ENST00000608299 610 ntBASIC2.33□□□□□ -2.04
PDGFBP01127 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.33□□□□□ -2.04
PDGFBP01127 AC139792.2-201ENST00000624218 587 ntBASIC2.33□□□□□ -2.04
PDGFBP01127 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDGFBP01127 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
PDGFBP01127 MIR412-201ENST00000362142 91 ntBASIC2.32□□□□□ -2.04
PDGFBP01127 RNU6-715P-201ENST00000365204 103 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms