Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RNU1-103P-201ENST00000516502 125 ntBASIC4.81□□□□□ -1.64
PTCD1O75127 SNORA43.2-201ENST00000516652 128 ntBASIC4.81□□□□□ -1.64
PTCD1O75127 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.81□□□□□ -1.64
PTCD1O75127 AP004607.1-201ENST00000524456 203 ntBASIC4.81□□□□□ -1.64
PTCD1O75127 MRPS36P4-201ENST00000534436 298 ntBASIC4.81□□□□□ -1.64
PTCD1O75127 AC069240.1-201ENST00000548774 375 ntBASIC4.81□□□□□ -1.64
PTCD1O75127 LINC00933-203ENST00000559812 219 ntBASIC4.81□□□□□ -1.64
PTCD1O75127 H3F3AP1-201ENST00000559984 334 ntBASIC4.81□□□□□ -1.64
PTCD1O75127 AL078605.1-201ENST00000603529 500 ntBASIC4.81□□□□□ -1.64
PTCD1O75127 U2.14-201ENST00000615943 113 ntBASIC4.81□□□□□ -1.64
PTCD1O75127 MIR376A1-201ENST00000616574 68 ntBASIC4.81□□□□□ -1.64
PTCD1O75127 AL590240.4-201ENST00000616908 390 ntBASIC4.81□□□□□ -1.64
PTCD1O75127 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.81□□□□□ -1.64
PTCD1O75127 AC118273.1-201ENST00000525324 3006 ntBASIC4.8□□□□□ -1.64
PTCD1O75127 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.8□□□□□ -1.64
PTCD1O75127 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.8□□□□□ -1.64
PTCD1O75127 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.8□□□□□ -1.64
PTCD1O75127 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PTCD1O75127 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTCD1O75127 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTCD1O75127 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTCD1O75127 RNU4-9P-201ENST00000364951 139 ntBASIC4.8□□□□□ -1.64
PTCD1O75127 RNU6-968P-201ENST00000384076 107 ntBASIC4.8□□□□□ -1.64
PTCD1O75127 VDAC1P3-201ENST00000434069 851 ntBASIC4.8□□□□□ -1.64
PTCD1O75127 AL356535.1-201ENST00000440335 398 ntBASIC4.8□□□□□ -1.64
PTCD1O75127 AC006026.2-201ENST00000457376 180 ntBASIC4.8□□□□□ -1.64
PTCD1O75127 snoU13.30-201ENST00000458951 104 ntBASIC4.8□□□□□ -1.64
PTCD1O75127 AC020895.1-201ENST00000595362 272 ntBASIC4.8□□□□□ -1.64
PTCD1O75127 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.8□□□□□ -1.64
PTCD1O75127 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
PTCD1O75127 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTCD1O75127 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PTCD1O75127 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.8□□□□□ -1.64
PTCD1O75127 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.79□□□□□ -1.64
PTCD1O75127 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTCD1O75127 Y_RNA.8-201ENST00000362353 102 ntBASIC4.79□□□□□ -1.64
PTCD1O75127 Z98749.2-208ENST00000381646 500 ntBASIC4.79□□□□□ -1.64
PTCD1O75127 RNY3P4-201ENST00000384428 101 ntBASIC4.79□□□□□ -1.64
PTCD1O75127 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTCD1O75127 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTCD1O75127 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTCD1O75127 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTCD1O75127 RPL21P104-201ENST00000464143 478 ntBASIC4.79□□□□□ -1.64
PTCD1O75127 RPL30P5-201ENST00000494923 336 ntBASIC4.79□□□□□ -1.64
PTCD1O75127 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.79□□□□□ -1.64
PTCD1O75127 SCARNA13-201ENST00000516672 275 ntBASIC4.79□□□□□ -1.64
PTCD1O75127 RNU6-703P-201ENST00000516946 107 ntBASIC4.79□□□□□ -1.64
PTCD1O75127 AC090281.1-201ENST00000523019 276 ntBASIC4.79□□□□□ -1.64
PTCD1O75127 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTCD1O75127 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.79□□□□□ -1.64
PTCD1O75127 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.79□□□□□ -1.64
PTCD1O75127 ZNF192P1-203ENST00000565888 810 ntBASIC4.79□□□□□ -1.64
PTCD1O75127 AL137849.1-201ENST00000604767 169 ntBASIC4.79□□□□□ -1.64
PTCD1O75127 FTX_3.1-201ENST00000610451 147 ntBASIC4.79□□□□□ -1.64
PTCD1O75127 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PTCD1O75127 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTCD1O75127 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTCD1O75127 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTCD1O75127 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
PTCD1O75127 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTCD1O75127 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTCD1O75127 RNU6-50P-201ENST00000362356 103 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 SNORD81.1-201ENST00000363064 77 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 Y_RNA.143-201ENST00000363520 106 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 RNA5SP50-201ENST00000363731 107 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 RNA5SP267-201ENST00000364893 126 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 RNU6-22P-201ENST00000384355 107 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 RNU6-102P-201ENST00000384485 104 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 RNU6-1117P-201ENST00000384525 104 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 MIR513A2-201ENST00000385249 127 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 RNA5SP146-201ENST00000410743 123 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 AC017079.2-201ENST00000416102 485 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 AL358453.1-201ENST00000422522 250 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 NDUFB4P6-201ENST00000436819 366 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 AL353705.4-201ENST00000449661 238 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 AC091021.1-201ENST00000468051 388 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 AC109925.1-201ENST00000478069 331 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 MIR2355-201ENST00000517199 87 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 AC024153.1-201ENST00000603103 365 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 Y_RNA.772-201ENST00000606692 102 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 AC104465.1-201ENST00000611365 139 ntBASIC4.78□□□□□ -1.64
PTCD1O75127 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PTCD1O75127 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTCD1O75127 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTCD1O75127 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.65
PTCD1O75127 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.65
PTCD1O75127 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTCD1O75127 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
PTCD1O75127 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTCD1O75127 RNU6-222P-201ENST00000362438 107 ntBASIC4.77□□□□□ -1.65
PTCD1O75127 Y_RNA.383-201ENST00000383855 97 ntBASIC4.77□□□□□ -1.65
PTCD1O75127 Y_RNA.398-201ENST00000383952 99 ntBASIC4.77□□□□□ -1.65
PTCD1O75127 Y_RNA.626-201ENST00000411288 95 ntBASIC4.77□□□□□ -1.65
PTCD1O75127 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.77□□□□□ -1.65
PTCD1O75127 HMGN2P30-201ENST00000423237 256 ntBASIC4.77□□□□□ -1.65
PTCD1O75127 TMEM167AP1-201ENST00000423409 219 ntBASIC4.77□□□□□ -1.65
PTCD1O75127 SNORD105B-201ENST00000458770 79 ntBASIC4.77□□□□□ -1.65
PTCD1O75127 RPS23P5-201ENST00000495419 428 ntBASIC4.77□□□□□ -1.65
PTCD1O75127 SNORA70.18-201ENST00000516696 98 ntBASIC4.77□□□□□ -1.65
PTCD1O75127 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms