Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC091152.3-201ENST00000604227 325 ntBASIC2.71□□□□□ -1.98
ZIC3O60481 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ZIC3O60481 AC135507.2-201ENST00000612443 309 ntBASIC2.71□□□□□ -1.98
ZIC3O60481 MIR6128-201ENST00000615528 109 ntBASIC2.71□□□□□ -1.98
ZIC3O60481 AC090617.7-201ENST00000623952 126 ntBASIC2.71□□□□□ -1.98
ZIC3O60481 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ZIC3O60481 MTND4P23-201ENST00000447723 1363 ntBASIC2.71□□□□□ -1.98
ZIC3O60481 AL035425.3-201ENST00000564206 4996 ntBASIC2.71□□□□□ -1.98
ZIC3O60481 AC093010.3-201ENST00000570269 15214 ntBASIC2.71□□□□□ -1.98
ZIC3O60481 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ZIC3O60481 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
ZIC3O60481 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
ZIC3O60481 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.7□□□□□ -1.98
ZIC3O60481 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ZIC3O60481 RNU6-105P-201ENST00000363909 104 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 RNU1-140P-201ENST00000365040 165 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 SNORA44-201ENST00000384584 132 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 RNU6-750P-201ENST00000390946 107 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 RNA5SP274-201ENST00000410484 108 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 RNU6-325P-201ENST00000411132 105 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 RNU6-293P-201ENST00000411259 106 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 Z92545.1-201ENST00000411782 234 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 AC245054.2-201ENST00000415639 319 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.7□□□□□ -1.98
ZIC3O60481 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.7□□□□□ -1.98
ZIC3O60481 AK3P2-201ENST00000507976 429 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 RNU6-1016P-201ENST00000516689 94 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 SNORD19.2-201ENST00000516978 73 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 ACA59.2-201ENST00000517061 156 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.7□□□□□ -1.98
ZIC3O60481 APOOP3-201ENST00000536787 586 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ZIC3O60481 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.7□□□□□ -1.98
ZIC3O60481 AC025281.1-201ENST00000567026 265 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 AC010653.1-201ENST00000571108 881 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 AL050343.2-201ENST00000607338 280 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 AC107294.3-201ENST00000609211 526 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 AC098657.3-201ENST00000620434 263 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 AC000403.1-201ENST00000613696 3585 ntBASIC2.7□□□□□ -1.98
ZIC3O60481 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
ZIC3O60481 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ZIC3O60481 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ZIC3O60481 AC008669.1-201ENST00000565823 2178 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 MIR148B-201ENST00000362252 99 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 RNU6-799P-201ENST00000363567 107 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 Y_RNA.813-201ENST00000364639 102 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 RNU6-1297P-201ENST00000384415 104 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 SNORD116-29-201ENST00000384516 83 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 SNORD116-20-201ENST00000384529 92 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 RNU6-601P-201ENST00000384540 107 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 RNU6-306P-201ENST00000384617 107 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 SNORA46-201ENST00000384762 135 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 RNU6-1106P-201ENST00000390845 107 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
ZIC3O60481 UBA52P6-201ENST00000399822 382 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 AC096649.2-201ENST00000416186 393 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.69□□□□□ -1.98
ZIC3O60481 RPS15AP10-201ENST00000432472 382 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 UBE2V1P7-201ENST00000446395 340 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.69□□□□□ -1.98
ZIC3O60481 SNORD19B-201ENST00000459623 84 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.69□□□□□ -1.98
ZIC3O60481 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.69□□□□□ -1.98
ZIC3O60481 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.69□□□□□ -1.98
ZIC3O60481 AC026782.1-201ENST00000512952 449 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 RNU1-54P-201ENST00000517181 120 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.69□□□□□ -1.98
ZIC3O60481 GLYCAM1-201ENST00000546596 285 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 AC009163.5-201ENST00000575421 637 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 VN1R107P-201ENST00000601784 209 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 AC093732.2-201ENST00000607950 274 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 AC019193.3-201ENST00000609144 554 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 AL133215.3-201ENST00000609801 448 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ZIC3O60481 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
ZIC3O60481 AC010889.1-201ENST00000566193 2666 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ZIC3O60481 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ZIC3O60481 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.69□□□□□ -1.98
ZIC3O60481 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
ZIC3O60481 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.68□□□□□ -1.98
ZIC3O60481 RPL9P7-201ENST00000330965 580 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 RNU6-694P-201ENST00000364071 147 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 RNU6-1317P-201ENST00000364582 104 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 MIR517A-201ENST00000385001 87 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 RNU6-370P-201ENST00000411008 104 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 AC096664.2-201ENST00000411843 406 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 AC074117.2-201ENST00000417130 397 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 MTND4P28-201ENST00000426217 387 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 AC022018.1-201ENST00000430685 241 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 AL513043.1-201ENST00000439124 535 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.68□□□□□ -1.98
ZIC3O60481 PCMTD1P1-201ENST00000455560 355 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 SNORD5.1-201ENST00000458800 75 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 AC091179.1-201ENST00000461606 579 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 RPL9P9-202ENST00000466501 579 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 MED28P2-201ENST00000475771 317 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 AC018437.1-201ENST00000492214 406 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 RPS27P26-201ENST00000494583 239 ntBASIC2.68□□□□□ -1.98
ZIC3O60481 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms