Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.63□□□□□ -2.15
LSM1O15116 AC009318.2-201ENST00000610917 651 ntBASIC1.63□□□□□ -2.15
LSM1O15116 TUSC7.1-201ENST00000610969 165 ntBASIC1.63□□□□□ -2.15
LSM1O15116 AC007792.1-201ENST00000623023 402 ntBASIC1.63□□□□□ -2.15
LSM1O15116 AL157786.1-207ENST00000627771 695 ntBASIC1.63□□□□□ -2.15
LSM1O15116 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.63□□□□□ -2.15
LSM1O15116 RNU4-28P-201ENST00000364739 141 ntBASIC1.62□□□□□ -2.15
LSM1O15116 RNU2-39P-201ENST00000410604 198 ntBASIC1.62□□□□□ -2.15
LSM1O15116 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.62□□□□□ -2.15
LSM1O15116 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.62□□□□□ -2.15
LSM1O15116 RBBP4P6-201ENST00000508098 202 ntBASIC1.62□□□□□ -2.15
LSM1O15116 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.62□□□□□ -2.15
LSM1O15116 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.62□□□□□ -2.15
LSM1O15116 MTND2P7-201ENST00000521337 640 ntBASIC1.62□□□□□ -2.15
LSM1O15116 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
LSM1O15116 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.62□□□□□ -2.15
LSM1O15116 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.62□□□□□ -2.15
LSM1O15116 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.62□□□□□ -2.15
LSM1O15116 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.62□□□□□ -2.15
LSM1O15116 AP000240.1-201ENST00000609910 452 ntBASIC1.62□□□□□ -2.15
LSM1O15116 U1.36-201ENST00000620684 176 ntBASIC1.62□□□□□ -2.15
LSM1O15116 AC009878.1-201ENST00000621819 340 ntBASIC1.62□□□□□ -2.15
LSM1O15116 AC131159.1-201ENST00000621854 213 ntBASIC1.62□□□□□ -2.15
LSM1O15116 MIR1248-201ENST00000629190 106 ntBASIC1.62□□□□□ -2.15
LSM1O15116 AC007671.2-201ENST00000637344 619 ntBASIC1.62□□□□□ -2.15
LSM1O15116 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.61□□□□□ -2.15
LSM1O15116 RNU6-212P-201ENST00000362642 104 ntBASIC1.61□□□□□ -2.15
LSM1O15116 Y_RNA.99-201ENST00000363138 105 ntBASIC1.61□□□□□ -2.15
LSM1O15116 MIR583-201ENST00000384846 75 ntBASIC1.61□□□□□ -2.15
LSM1O15116 RNU2-3P-201ENST00000410144 191 ntBASIC1.61□□□□□ -2.15
LSM1O15116 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.61□□□□□ -2.15
LSM1O15116 CBX3P6-201ENST00000430257 527 ntBASIC1.61□□□□□ -2.15
LSM1O15116 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.61□□□□□ -2.15
LSM1O15116 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.61□□□□□ -2.15
LSM1O15116 Z73417.1-201ENST00000447373 778 ntBASIC1.61□□□□□ -2.15
LSM1O15116 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.61□□□□□ -2.15
LSM1O15116 SNORD11.1-201ENST00000459482 85 ntBASIC1.61□□□□□ -2.15
LSM1O15116 AC068587.2-201ENST00000478386 781 ntBASIC1.61□□□□□ -2.15
LSM1O15116 MTND2P14-201ENST00000482139 351 ntBASIC1.61□□□□□ -2.15
LSM1O15116 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.61□□□□□ -2.15
LSM1O15116 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.61□□□□□ -2.15
LSM1O15116 RNU1-41P-201ENST00000516161 162 ntBASIC1.61□□□□□ -2.15
LSM1O15116 RNU1-48P-201ENST00000516400 162 ntBASIC1.61□□□□□ -2.15
LSM1O15116 RNU6-965P-201ENST00000516721 96 ntBASIC1.61□□□□□ -2.15
LSM1O15116 AP005435.4-201ENST00000529514 284 ntBASIC1.61□□□□□ -2.15
LSM1O15116 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.61□□□□□ -2.15
LSM1O15116 HMGN1P30-201ENST00000589286 268 ntBASIC1.61□□□□□ -2.15
LSM1O15116 AC013412.1-201ENST00000610687 192 ntBASIC1.61□□□□□ -2.15
LSM1O15116 AC084768.2-201ENST00000622736 221 ntBASIC1.61□□□□□ -2.15
LSM1O15116 ZNF680P1-201ENST00000436625 1469 ntBASIC1.61□□□□□ -2.15
LSM1O15116 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
LSM1O15116 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
LSM1O15116 snoU2_19.1-201ENST00000362361 80 ntBASIC1.6□□□□□ -2.15
LSM1O15116 RNU6-78P-201ENST00000362897 107 ntBASIC1.6□□□□□ -2.15
LSM1O15116 SNORA48.1-201ENST00000390879 135 ntBASIC1.6□□□□□ -2.15
LSM1O15116 SNORA40.18-201ENST00000391200 128 ntBASIC1.6□□□□□ -2.15
LSM1O15116 RAP1BP3-201ENST00000407180 549 ntBASIC1.6□□□□□ -2.15
LSM1O15116 RNU6-584P-201ENST00000410350 95 ntBASIC1.6□□□□□ -2.15
LSM1O15116 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.6□□□□□ -2.15
LSM1O15116 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.6□□□□□ -2.15
LSM1O15116 AC119618.1-201ENST00000434191 222 ntBASIC1.6□□□□□ -2.15
LSM1O15116 HMGB1P31-201ENST00000437242 427 ntBASIC1.6□□□□□ -2.15
LSM1O15116 HSPE1P24-201ENST00000450782 238 ntBASIC1.6□□□□□ -2.15
LSM1O15116 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.6□□□□□ -2.15
LSM1O15116 AC093259.1-201ENST00000509755 300 ntBASIC1.6□□□□□ -2.15
LSM1O15116 AC117522.1-201ENST00000509821 380 ntBASIC1.6□□□□□ -2.15
LSM1O15116 AC009646.1-201ENST00000510455 318 ntBASIC1.6□□□□□ -2.15
LSM1O15116 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.6□□□□□ -2.15
LSM1O15116 MTND2P32-201ENST00000521584 1038 ntBASIC1.6□□□□□ -2.15
LSM1O15116 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.6□□□□□ -2.15
LSM1O15116 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.6□□□□□ -2.15
LSM1O15116 AC091135.1-201ENST00000585943 307 ntBASIC1.6□□□□□ -2.15
LSM1O15116 AC245884.10-201ENST00000597355 337 ntBASIC1.6□□□□□ -2.15
LSM1O15116 AL670379.2-201ENST00000604983 252 ntBASIC1.6□□□□□ -2.15
LSM1O15116 AL670379.4-201ENST00000605279 254 ntBASIC1.6□□□□□ -2.15
LSM1O15116 MIR7844-201ENST00000616161 122 ntBASIC1.6□□□□□ -2.15
LSM1O15116 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.6□□□□□ -2.15
LSM1O15116 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LSM1O15116 SNORD56.1-201ENST00000362913 68 ntBASIC1.59□□□□□ -2.15
LSM1O15116 RNA5SP100-201ENST00000410903 110 ntBASIC1.59□□□□□ -2.15
LSM1O15116 RNA5SP59-201ENST00000410922 110 ntBASIC1.59□□□□□ -2.15
LSM1O15116 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM1O15116 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.59□□□□□ -2.15
LSM1O15116 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM1O15116 AL357134.1-201ENST00000445848 426 ntBASIC1.59□□□□□ -2.15
LSM1O15116 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM1O15116 RPL30P12-201ENST00000474666 353 ntBASIC1.59□□□□□ -2.15
LSM1O15116 UBL5P3-201ENST00000475112 231 ntBASIC1.59□□□□□ -2.15
LSM1O15116 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.59□□□□□ -2.15
LSM1O15116 AF131216.2-201ENST00000512316 564 ntBASIC1.59□□□□□ -2.15
LSM1O15116 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM1O15116 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
LSM1O15116 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.59□□□□□ -2.15
LSM1O15116 AC022616.3-201ENST00000523940 148 ntBASIC1.59□□□□□ -2.15
LSM1O15116 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
LSM1O15116 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM1O15116 AL160236.1-201ENST00000556317 195 ntBASIC1.59□□□□□ -2.15
LSM1O15116 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.59□□□□□ -2.15
LSM1O15116 AC002400.1-201ENST00000569310 726 ntBASIC1.59□□□□□ -2.15
LSM1O15116 MIR3198-2-201ENST00000577868 80 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms