Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MTATP6P3-201ENST00000581686 676 ntBASIC2.16□□□□□ -2.06
SLC28A1O00337 MIR3611-201ENST00000584484 83 ntBASIC2.16□□□□□ -2.06
SLC28A1O00337 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.16□□□□□ -2.06
SLC28A1O00337 AL670379.2-201ENST00000604983 252 ntBASIC2.16□□□□□ -2.06
SLC28A1O00337 AP001596.2-201ENST00000608410 312 ntBASIC2.16□□□□□ -2.06
SLC28A1O00337 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
SLC28A1O00337 AC009831.4-201ENST00000620744 325 ntBASIC2.16□□□□□ -2.06
SLC28A1O00337 U4.7-201ENST00000638126 106 ntBASIC2.16□□□□□ -2.06
SLC28A1O00337 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.16□□□□□ -2.06
SLC28A1O00337 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
SLC28A1O00337 RNU6-37P-201ENST00000362692 107 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNU6-552P-201ENST00000362869 119 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNU6-525P-201ENST00000363685 104 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNU6-1210P-201ENST00000363775 107 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNU6-11P-201ENST00000364234 107 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNU6-25P-201ENST00000383873 107 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNU6-1-201ENST00000383898 107 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNU6-1103P-201ENST00000384150 107 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNU6-48P-201ENST00000384161 107 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNU6-36P-201ENST00000384172 107 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNU6-4P-201ENST00000384205 107 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNU6-5P-201ENST00000384238 107 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNU6-3P-201ENST00000384314 107 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNU6-16P-201ENST00000384385 107 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNU6-15P-201ENST00000384534 107 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNU6-2-201ENST00000384627 107 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNU6-29P-201ENST00000384637 107 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 SNORA67.4-201ENST00000384688 142 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNU6-9-201ENST00000384776 107 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNU6-33P-201ENST00000384793 107 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 SNORA16.2-201ENST00000390991 127 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RPS4XP8-201ENST00000402039 771 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNA5SP270-201ENST00000411361 118 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.15□□□□□ -2.07
SLC28A1O00337 AIMP1P2-201ENST00000425294 312 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 WARS2P1-201ENST00000429678 537 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.15□□□□□ -2.07
SLC28A1O00337 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.15□□□□□ -2.07
SLC28A1O00337 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.15□□□□□ -2.07
SLC28A1O00337 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.15□□□□□ -2.07
SLC28A1O00337 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.15□□□□□ -2.07
SLC28A1O00337 snoU13.14-201ENST00000459372 104 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.15□□□□□ -2.07
SLC28A1O00337 HMGB1P29-201ENST00000505659 499 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 AC079140.5-201ENST00000507882 310 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SLC28A1O00337 AC023050.3-201ENST00000541142 333 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 MIR3126-201ENST00000577443 74 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.15□□□□□ -2.07
SLC28A1O00337 AL391646.1-201ENST00000603860 190 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 RNU6-6P-201ENST00000606623 107 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 AC007684.1-201ENST00000609671 477 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 AL161423.1-201ENST00000613700 262 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 AC090517.3-201ENST00000625170 141 ntBASIC2.15□□□□□ -2.07
SLC28A1O00337 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
SLC28A1O00337 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.15□□□□□ -2.07
SLC28A1O00337 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SLC28A1O00337 Y_RNA.40-201ENST00000362645 93 ntBASIC2.14□□□□□ -2.07
SLC28A1O00337 RNU6-996P-201ENST00000365438 107 ntBASIC2.14□□□□□ -2.07
SLC28A1O00337 RNU6-1119P-201ENST00000384349 108 ntBASIC2.14□□□□□ -2.07
SLC28A1O00337 Y_RNA.582-201ENST00000391023 95 ntBASIC2.14□□□□□ -2.07
SLC28A1O00337 AC068050.1-201ENST00000394891 380 ntBASIC2.14□□□□□ -2.07
SLC28A1O00337 DEFB108C-201ENST00000400154 252 ntBASIC2.14□□□□□ -2.07
SLC28A1O00337 AL591034.2-201ENST00000402839 359 ntBASIC2.14□□□□□ -2.07
SLC28A1O00337 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.14□□□□□ -2.07
SLC28A1O00337 MTCO2P19-201ENST00000427513 598 ntBASIC2.14□□□□□ -2.07
SLC28A1O00337 AL451074.3-201ENST00000437709 472 ntBASIC2.14□□□□□ -2.07
SLC28A1O00337 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.14□□□□□ -2.07
SLC28A1O00337 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.14□□□□□ -2.07
SLC28A1O00337 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.14□□□□□ -2.07
SLC28A1O00337 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.14□□□□□ -2.07
SLC28A1O00337 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.14□□□□□ -2.07
SLC28A1O00337 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.14□□□□□ -2.07
SLC28A1O00337 AP001893.2-201ENST00000526949 202 ntBASIC2.14□□□□□ -2.07
SLC28A1O00337 AL137161.1-201ENST00000532231 390 ntBASIC2.14□□□□□ -2.07
SLC28A1O00337 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.14□□□□□ -2.07
SLC28A1O00337 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.14□□□□□ -2.07
SLC28A1O00337 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.14□□□□□ -2.07
SLC28A1O00337 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.14□□□□□ -2.07
SLC28A1O00337 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SLC28A1O00337 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.13□□□□□ -2.07
SLC28A1O00337 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
SLC28A1O00337 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SLC28A1O00337 Y_RNA.1-201ENST00000352915 104 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 RNU1-23P-201ENST00000363361 144 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 SNORA25B-201ENST00000365507 128 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 RNU6-1042P-201ENST00000384204 107 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 SNORA48.3-201ENST00000391081 134 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 RNU6-903P-201ENST00000391270 109 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 CBX3P9-201ENST00000402326 552 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 AC009963.1-201ENST00000417265 157 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 MTCYBP8-201ENST00000422855 651 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 AC007969.2-201ENST00000441891 191 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 USP9YP8-201ENST00000441913 500 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.13□□□□□ -2.07
SLC28A1O00337 TPT1P7-201ENST00000458300 517 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.13□□□□□ -2.07
SLC28A1O00337 AC108078.1-201ENST00000508073 725 ntBASIC2.13□□□□□ -2.07
SLC28A1O00337 RNU7-193P-201ENST00000516723 65 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms