Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AL163540.1-201ENST00000485382 386 ntBASIC0.06□□□□□ -2.4
CHKB-CPT1BH3BT56 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.06□□□□□ -2.4
CHKB-CPT1BH3BT56 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.06□□□□□ -2.4
CHKB-CPT1BH3BT56 AP000907.2-201ENST00000530827 353 ntBASIC0.06□□□□□ -2.4
CHKB-CPT1BH3BT56 AP000873.5-201ENST00000533906 236 ntBASIC0.06□□□□□ -2.4
CHKB-CPT1BH3BT56 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.06□□□□□ -2.4
CHKB-CPT1BH3BT56 AL442163.3-201ENST00000554110 156 ntBASIC0.06□□□□□ -2.4
CHKB-CPT1BH3BT56 AC109446.2-201ENST00000567872 497 ntBASIC0.06□□□□□ -2.4
CHKB-CPT1BH3BT56 MIR4637-201ENST00000582405 84 ntBASIC0.06□□□□□ -2.4
CHKB-CPT1BH3BT56 AC090330.1-201ENST00000588646 764 ntBASIC0.06□□□□□ -2.4
CHKB-CPT1BH3BT56 VN1R83P-201ENST00000595685 445 ntBASIC0.06□□□□□ -2.4
CHKB-CPT1BH3BT56 KC877982.1-201ENST00000602313 470 ntBASIC0.06□□□□□ -2.4
CHKB-CPT1BH3BT56 AC126177.8-201ENST00000618339 1015 ntBASIC0.06□□□□□ -2.4
CHKB-CPT1BH3BT56 AC009509.4-201ENST00000619202 509 ntBASIC0.06□□□□□ -2.4
CHKB-CPT1BH3BT56 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.06□□□□□ -2.4
CHKB-CPT1BH3BT56 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
CHKB-CPT1BH3BT56 MIRLET7D-201ENST00000362263 87 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 U3.9-201ENST00000363823 204 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 RNA5SP259-201ENST00000365541 109 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 RNU6-843P-201ENST00000384454 104 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 MIR217-201ENST00000384817 110 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 AL357139.1-201ENST00000407792 426 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 Y_RNA.597-201ENST00000410463 100 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 MTND1P21-201ENST00000412991 285 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 COX7BP2-201ENST00000437976 242 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 snoU13.8-201ENST00000458890 104 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 RPL37P6-201ENST00000460682 294 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 TMEM251P1-201ENST00000503717 318 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 AC010587.2-201ENST00000511727 448 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 AF131216.2-201ENST00000512316 564 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 RNU6-714P-201ENST00000516963 103 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 RN7SKP258-201ENST00000517151 304 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 SUMO2P18-201ENST00000518873 252 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 AC078795.2-201ENST00000602835 1252 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 AC025811.1-201ENST00000604312 472 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 RNU6-87P-201ENST00000607561 108 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 AP001033.2-201ENST00000609701 1003 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 AC068787.1-201ENST00000623908 691 ntBASIC0.05□□□□□ -2.4
CHKB-CPT1BH3BT56 MIR340-201ENST00000362125 95 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 RNU6-1019P-201ENST00000364424 107 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 RNU6-1327P-201ENST00000365302 105 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 RNU6-53P-201ENST00000365367 106 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 SUGT1P1-201ENST00000379514 476 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 AC234064.1-201ENST00000436312 247 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 AC245047.7-201ENST00000440265 293 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 AC244505.5-201ENST00000443639 207 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 AL513124.1-201ENST00000450410 614 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 AC104629.1-201ENST00000494226 508 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 AC105758.1-201ENST00000506038 399 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 AC022493.2-201ENST00000506122 481 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 RNA5SP384-201ENST00000516615 116 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 AC009902.1-201ENST00000519351 183 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 AP000654.2-201ENST00000605633 586 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 AL392048.1-201ENST00000613946 534 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 AC006213.5-201ENST00000619673 288 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 AC005858.4-201ENST00000623191 700 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 MIR3529-201ENST00000637713 78 ntBASIC0.04□□□□□ -2.4
CHKB-CPT1BH3BT56 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 OR4G2P-201ENST00000328113 903 ntBASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 RNA5SP499-201ENST00000363982 119 ntBASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 RAP1BP3-201ENST00000407180 549 ntBASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 SNORA11.2-201ENST00000408318 127 ntBASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 RNA5SP111-201ENST00000411386 101 ntBASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 AC098934.3-201ENST00000430450 190 ntBASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 RPS15AP10-201ENST00000432472 382 ntBASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 AC233266.1-201ENST00000454518 96 ntBASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 RPS26P45-201ENST00000471748 340 ntBASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 AC091860.1-201ENST00000505723 432 ntBASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 CYP3A137P-201ENST00000562436 69 ntBASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 BNIP3P30-201ENST00000601184 574 ntBASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 AL158827.2-201ENST00000602494 330 ntBASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 DPPA3P3-201ENST00000603842 430 ntBASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 AC242852.1-201ENST00000612151 96 ntBASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 AC243829.3-201ENST00000622177 108 ntBASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 AC244015.1-201ENST00000622301 99 ntBASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 AL691447.3-201ENST00000635020 330 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms