Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 CYP3A52P-201ENST00000563326 91 ntBASIC-0.08□□□□□ -2.42
COL6A5A8TX70 MIR3165-201ENST00000579874 75 ntBASIC-0.08□□□□□ -2.42
COL6A5A8TX70 AC092106.3-201ENST00000611308 722 ntBASIC-0.08□□□□□ -2.42
COL6A5A8TX70 AC104465.1-201ENST00000611365 139 ntBASIC-0.08□□□□□ -2.42
COL6A5A8TX70 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
COL6A5A8TX70 AC093648.1-201ENST00000623546 606 ntBASIC-0.08□□□□□ -2.42
COL6A5A8TX70 RNA5SP391-201ENST00000363456 119 ntBASIC-0.08□□□□□ -2.42
COL6A5A8TX70 SNORD115-24-201ENST00000363528 82 ntBASIC-0.08□□□□□ -2.42
COL6A5A8TX70 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.08□□□□□ -2.42
COL6A5A8TX70 RNY4P36-201ENST00000391116 96 ntBASIC-0.08□□□□□ -2.42
COL6A5A8TX70 RNU6-735P-201ENST00000410612 107 ntBASIC-0.08□□□□□ -2.42
COL6A5A8TX70 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.08□□□□□ -2.42
COL6A5A8TX70 AC023194.1-201ENST00000493084 308 ntBASIC-0.08□□□□□ -2.42
COL6A5A8TX70 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC-0.08□□□□□ -2.42
COL6A5A8TX70 AC069304.2-201ENST00000605154 435 ntBASIC-0.08□□□□□ -2.42
COL6A5A8TX70 MIR1246-201ENST00000636535 73 ntBASIC-0.08□□□□□ -2.42
COL6A5A8TX70 RNU4-23P-201ENST00000362839 140 ntBASIC-0.09□□□□□ -2.42
COL6A5A8TX70 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC-0.09□□□□□ -2.42
COL6A5A8TX70 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.09□□□□□ -2.42
COL6A5A8TX70 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.09□□□□□ -2.42
COL6A5A8TX70 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC-0.09□□□□□ -2.42
COL6A5A8TX70 AC093534.1-201ENST00000504977 132 ntBASIC-0.09□□□□□ -2.42
COL6A5A8TX70 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC-0.09□□□□□ -2.42
COL6A5A8TX70 AC138749.5-201ENST00000611461 208 ntBASIC-0.09□□□□□ -2.42
COL6A5A8TX70 RNU6-360P-201ENST00000390944 104 ntBASIC-0.09□□□□□ -2.42
COL6A5A8TX70 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.09□□□□□ -2.42
COL6A5A8TX70 MTND2P19-201ENST00000449129 1012 ntBASIC-0.09□□□□□ -2.42
COL6A5A8TX70 snoU13.7-201ENST00000459220 104 ntBASIC-0.09□□□□□ -2.42
COL6A5A8TX70 RNA5SP227-201ENST00000516184 113 ntBASIC-0.09□□□□□ -2.42
COL6A5A8TX70 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.09□□□□□ -2.42
COL6A5A8TX70 AC012669.1-201ENST00000603209 283 ntBASIC-0.09□□□□□ -2.42
COL6A5A8TX70 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC-0.09□□□□□ -2.42
COL6A5A8TX70 AC106858.1-201ENST00000637497 429 ntBASIC-0.09□□□□□ -2.42
COL6A5A8TX70 RNU6-263P-201ENST00000363811 107 ntBASIC-0.1□□□□□ -2.42
COL6A5A8TX70 RNU6-880P-201ENST00000384526 107 ntBASIC-0.1□□□□□ -2.42
COL6A5A8TX70 MIR325-201ENST00000385260 98 ntBASIC-0.1□□□□□ -2.42
COL6A5A8TX70 RPL26P27-201ENST00000414397 437 ntBASIC-0.1□□□□□ -2.42
COL6A5A8TX70 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.1□□□□□ -2.42
COL6A5A8TX70 MTCO2P12-201ENST00000427426 682 ntBASIC-0.1□□□□□ -2.42
COL6A5A8TX70 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC-0.1□□□□□ -2.42
COL6A5A8TX70 AL353691.1-201ENST00000451332 387 ntBASIC-0.1□□□□□ -2.42
COL6A5A8TX70 FCF1P6-201ENST00000456841 595 ntBASIC-0.1□□□□□ -2.42
COL6A5A8TX70 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.1□□□□□ -2.42
COL6A5A8TX70 AP002453.2-201ENST00000533503 320 ntBASIC-0.1□□□□□ -2.42
COL6A5A8TX70 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.1□□□□□ -2.42
COL6A5A8TX70 AC090888.2-201ENST00000559765 1144 ntBASIC-0.1□□□□□ -2.42
COL6A5A8TX70 AL590229.1-201ENST00000603497 542 ntBASIC-0.1□□□□□ -2.42
COL6A5A8TX70 AC097065.2-201ENST00000608159 533 ntBASIC-0.1□□□□□ -2.42
COL6A5A8TX70 AC100810.6-201ENST00000638068 285 ntBASIC-0.1□□□□□ -2.42
COL6A5A8TX70 OR5T3-201ENST00000303059 1023 ntBASIC-0.1□□□□□ -2.43
COL6A5A8TX70 RPS15AP40-201ENST00000419621 391 ntBASIC-0.1□□□□□ -2.43
COL6A5A8TX70 MTND4P20-201ENST00000424125 869 ntBASIC-0.1□□□□□ -2.43
COL6A5A8TX70 AL353777.1-201ENST00000425552 326 ntBASIC-0.1□□□□□ -2.43
COL6A5A8TX70 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC-0.1□□□□□ -2.43
COL6A5A8TX70 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC-0.1□□□□□ -2.43
COL6A5A8TX70 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC-0.1□□□□□ -2.43
COL6A5A8TX70 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
COL6A5A8TX70 RNU1-131P-201ENST00000458943 161 ntBASIC-0.1□□□□□ -2.43
COL6A5A8TX70 RPL7P43-201ENST00000478876 753 ntBASIC-0.1□□□□□ -2.43
COL6A5A8TX70 PDCD5P2-201ENST00000507570 312 ntBASIC-0.1□□□□□ -2.43
COL6A5A8TX70 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC-0.1□□□□□ -2.43
COL6A5A8TX70 AC026271.5-201ENST00000577873 130 ntBASIC-0.1□□□□□ -2.43
COL6A5A8TX70 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC-0.1□□□□□ -2.43
COL6A5A8TX70 AL391994.1-201ENST00000254724 282 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 SNORD33-201ENST00000362761 85 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 MIR1267-201ENST00000408723 78 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 MTCO3P12-201ENST00000416718 547 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 AC114482.1-201ENST00000418010 247 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 RAC1P8-201ENST00000427086 527 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 AC016925.1-201ENST00000458303 298 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 MTATP6P9-201ENST00000515039 680 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 RN7SKP12-201ENST00000516275 143 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC-0.11□□□□□ -2.43
COL6A5A8TX70 IGJP1-201ENST00000522682 475 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC-0.11□□□□□ -2.43
COL6A5A8TX70 AL391001.1-201ENST00000602747 715 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 AL357312.1-201ENST00000603879 298 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.11□□□□□ -2.43
COL6A5A8TX70 AL138963.2-201ENST00000605137 226 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 AC069294.1-201ENST00000608397 350 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 RNU6-952P-201ENST00000391164 108 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 AC098592.2-201ENST00000413158 265 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.11□□□□□ -2.43
COL6A5A8TX70 AC147055.4-201ENST00000504399 745 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 HAUS1P3-201ENST00000523909 662 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 AC233702.2-202ENST00000562547 291 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 AC092447.9-201ENST00000603395 144 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 AC021506.2-201ENST00000612354 169 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 AL133370.2-201ENST00000619934 439 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 AC004009.2-201ENST00000623016 728 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 AC068057.2-201ENST00000624047 895 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 AC009033.1-201ENST00000624279 431 ntBASIC-0.11□□□□□ -2.43
COL6A5A8TX70 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.12□□□□□ -2.43
COL6A5A8TX70 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
COL6A5A8TX70 GTF2IP20-201ENST00000431663 360 ntBASIC-0.12□□□□□ -2.43
COL6A5A8TX70 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC-0.12□□□□□ -2.43
COL6A5A8TX70 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.12□□□□□ -2.43
COL6A5A8TX70 AC104136.1-201ENST00000512969 394 ntBASIC-0.12□□□□□ -2.43
COL6A5A8TX70 HSPA8P13-201ENST00000523715 472 ntBASIC-0.12□□□□□ -2.43
COL6A5A8TX70 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms