Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 Y_RNA.323-201ENST00000365157 109 ntBASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 MIR488-201ENST00000365739 83 ntBASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 MIR300-201ENST00000401138 83 ntBASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 AC245291.1-201ENST00000419501 328 ntBASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 RPL27AP5-201ENST00000469428 449 ntBASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 RNU6-113P-201ENST00000516653 101 ntBASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 RNU6-1098P-201ENST00000516772 96 ntBASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 AC137627.1-201ENST00000545761 289 ntBASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 FAM27D1-201ENST00000612308 341 ntBASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 MIR8080-201ENST00000622224 89 ntBASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 AC005086.4-201ENST00000623065 213 ntBASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.13□□□□□ -1.43
SPDYE4A6NLX3 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 AL589743.1-201ENST00000551932 2712 ntBASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 RNA5SP189-201ENST00000364920 115 ntBASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 RNA5SP211-201ENST00000365516 117 ntBASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 RNU6-171P-201ENST00000384354 107 ntBASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 SNORD14D-201ENST00000384390 87 ntBASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 MIR1283-1-201ENST00000408494 87 ntBASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 SNORD11-201ENST00000459124 84 ntBASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 AC106785.1-201ENST00000565935 262 ntBASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 MIR3936-201ENST00000584304 110 ntBASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 MIR4753-201ENST00000585119 83 ntBASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 AC010733.2-201ENST00000589496 5702 ntBASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SPDYE4A6NLX3 AP004607.3-201ENST00000530354 3915 ntBASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 AC058791.1-201ENST00000608412 3198 ntBASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 SNORA58B-201ENST00000364259 136 ntBASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 RNU6-1138P-201ENST00000365359 106 ntBASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 AL590004.2-201ENST00000404787 371 ntBASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 AC002075.2-201ENST00000425207 252 ntBASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 SDC4P-201ENST00000453285 601 ntBASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 RNU6-221P-201ENST00000459541 99 ntBASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 AC005921.1-201ENST00000510589 286 ntBASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 RNU6-365P-201ENST00000517113 106 ntBASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 AP006245.2-201ENST00000522004 300 ntBASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 AC007751.1-201ENST00000529260 376 ntBASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 IMMP1LP3-201ENST00000604197 224 ntBASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPDYE4A6NLX3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 RNA5SP91-201ENST00000390902 119 ntBASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 AC007064.1-201ENST00000412238 351 ntBASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 NDUFB1P1-201ENST00000435191 180 ntBASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 AC010469.1-201ENST00000463864 576 ntBASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 RPL7AP28-201ENST00000464513 571 ntBASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 OR9P1P-201ENST00000496431 281 ntBASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 RNA5SP236-201ENST00000516169 116 ntBASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 RN7SKP12-201ENST00000516275 143 ntBASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 RNU7-149P-201ENST00000516739 59 ntBASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 AC021678.3-201ENST00000517893 476 ntBASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SPDYE4A6NLX3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
SPDYE4A6NLX3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
SPDYE4A6NLX3 SNORA63.5-201ENST00000363548 123 ntBASIC6.09□□□□□ -1.43
SPDYE4A6NLX3 RNU6-573P-201ENST00000383938 106 ntBASIC6.09□□□□□ -1.43
SPDYE4A6NLX3 RNU6-820P-201ENST00000384273 107 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms