Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC85CA6NKD9 RNU6-527P-201ENST00000363425 104 ntBASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 RNU1-115P-201ENST00000365329 160 ntBASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 AC068781.1-201ENST00000488231 618 ntBASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 RPL17P19-201ENST00000489069 552 ntBASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 SNORA70.14-201ENST00000516205 110 ntBASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 CBX3P8-201ENST00000532412 525 ntBASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 AL158827.2-201ENST00000602494 330 ntBASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 AC024581.2-201ENST00000619986 252 ntBASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 AL691447.3-201ENST00000635020 330 ntBASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 ZNF299P-201ENST00000406845 1804 ntBASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC85CA6NKD9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 AC091152.2-201ENST00000591628 2569 ntBASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 Y_RNA.162-201ENST00000363683 102 ntBASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 Y_RNA.216-201ENST00000364205 93 ntBASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 SNORA22B-201ENST00000383876 138 ntBASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 RNA5SP306-201ENST00000411087 107 ntBASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 RPL23AP95-201ENST00000426806 265 ntBASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 MTND3P9-201ENST00000429526 346 ntBASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 RPL23AP62-201ENST00000463396 453 ntBASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 AP001025.1-201ENST00000486139 332 ntBASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 MIR5701-3-201ENST00000578890 82 ntBASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 MIR5701-1-201ENST00000585138 82 ntBASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 AC006557.5-201ENST00000603126 811 ntBASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 MIR5701-2-201ENST00000615634 82 ntBASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC85CA6NKD9 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 AC117470.1-201ENST00000381974 330 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 RNU6-622P-201ENST00000384272 103 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 RNU6-748P-201ENST00000384648 107 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 RNU6-750P-201ENST00000390946 107 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 RNA5SP146-201ENST00000410743 123 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 RN7SKP167-201ENST00000411047 285 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 AL139281.1-201ENST00000422120 335 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 AC008267.5-201ENST00000424928 265 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 FO393415.2-201ENST00000480085 343 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 AC091826.1-201ENST00000514065 313 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 RNU1-41P-201ENST00000516161 162 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 RNU1-48P-201ENST00000516400 162 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 SNORD59.2-201ENST00000516873 68 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 RNU6-699P-201ENST00000517081 110 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 RNU6-264P-201ENST00000517134 104 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 RN7SKP295-201ENST00000517264 153 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 RNU6-988P-201ENST00000519081 107 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 AL162713.1-201ENST00000604480 262 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 AC019159.1-201ENST00000605094 187 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 RNU6-91P-201ENST00000607774 107 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 AL732372.2-225ENST00000642124 456 ntBASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CCDC85CA6NKD9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 MAPK10-266ENST00000641066 6555 ntBASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 AC073073.2-201ENST00000609827 2578 ntBASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 Y_RNA.148-201ENST00000363557 117 ntBASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 RNU6-595P-201ENST00000363944 107 ntBASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 Y_RNA.496-201ENST00000384444 101 ntBASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 Y_RNA.533-201ENST00000384596 114 ntBASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 Y_RNA.577-201ENST00000384794 101 ntBASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 BTF3L4P2-201ENST00000392798 346 ntBASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 RNA5SP390-201ENST00000410191 113 ntBASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 RNU6-1245P-201ENST00000411130 106 ntBASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 MCFD2P1-201ENST00000417812 300 ntBASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 AC099799.1-201ENST00000439809 192 ntBASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 RNA5SP208-201ENST00000516156 78 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms