Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC100810.6-201ENST00000638068 285 ntBASIC-0.45□□□□□ -2.48
LINC01549A6NIU2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.45□□□□□ -2.48
LINC01549A6NIU2 RNU6-222P-201ENST00000362438 107 ntBASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 RNU6V-201ENST00000384105 107 ntBASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 MIR499A-201ENST00000384903 122 ntBASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 SNORA16.2-201ENST00000390991 127 ntBASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 AC130509.1-201ENST00000464158 433 ntBASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 AC104982.1-201ENST00000478775 574 ntBASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 AC069113.3-201ENST00000521019 150 ntBASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 C1DP5-201ENST00000525775 383 ntBASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 AL121821.2-201ENST00000556081 394 ntBASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 AC023158.1-201ENST00000561632 1025 ntBASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 HMGB1P33-201ENST00000563485 527 ntBASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 AC098614.4-201ENST00000607601 462 ntBASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 AC004908.3-201ENST00000610248 625 ntBASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.46□□□□□ -2.48
LINC01549A6NIU2 SNORD114-5-201ENST00000362928 70 ntBASIC-0.47□□□□□ -2.48
LINC01549A6NIU2 RNY1P8-201ENST00000383970 114 ntBASIC-0.47□□□□□ -2.48
LINC01549A6NIU2 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.47□□□□□ -2.48
LINC01549A6NIU2 AC005094.1-201ENST00000440420 368 ntBASIC-0.47□□□□□ -2.48
LINC01549A6NIU2 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.47□□□□□ -2.48
LINC01549A6NIU2 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC-0.47□□□□□ -2.48
LINC01549A6NIU2 RNA5SP437-201ENST00000517249 129 ntBASIC-0.47□□□□□ -2.48
LINC01549A6NIU2 CR383656.7-201ENST00000548164 174 ntBASIC-0.47□□□□□ -2.48
LINC01549A6NIU2 MTND5P31-201ENST00000419366 1374 ntBASIC-0.47□□□□□ -2.49
LINC01549A6NIU2 AC092268.1-201ENST00000342691 405 ntBASIC-0.48□□□□□ -2.49
LINC01549A6NIU2 RNU6-877P-201ENST00000383868 107 ntBASIC-0.48□□□□□ -2.49
LINC01549A6NIU2 RPL22P22-201ENST00000395439 379 ntBASIC-0.48□□□□□ -2.49
LINC01549A6NIU2 BRK1P2-201ENST00000442875 223 ntBASIC-0.48□□□□□ -2.49
LINC01549A6NIU2 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC-0.48□□□□□ -2.49
LINC01549A6NIU2 snoU13.18-201ENST00000459483 104 ntBASIC-0.48□□□□□ -2.49
LINC01549A6NIU2 RPL23AP54-201ENST00000495129 419 ntBASIC-0.48□□□□□ -2.49
LINC01549A6NIU2 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.48□□□□□ -2.49
LINC01549A6NIU2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC-0.48□□□□□ -2.49
LINC01549A6NIU2 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC-0.48□□□□□ -2.49
LINC01549A6NIU2 GAS5-AS1-201ENST00000602767 694 ntBASIC-0.48□□□□□ -2.49
LINC01549A6NIU2 AL671309.1-201ENST00000603750 544 ntBASIC-0.48□□□□□ -2.49
LINC01549A6NIU2 AL031176.1-201ENST00000604554 466 ntBASIC-0.48□□□□□ -2.49
LINC01549A6NIU2 AC107075.1-201ENST00000613695 314 ntBASIC-0.48□□□□□ -2.49
LINC01549A6NIU2 AC130454.1-201ENST00000622948 401 ntBASIC-0.48□□□□□ -2.49
LINC01549A6NIU2 AC138627.2-201ENST00000624202 601 ntBASIC-0.48□□□□□ -2.49
LINC01549A6NIU2 AL359757.2-201ENST00000624309 274 ntBASIC-0.48□□□□□ -2.49
LINC01549A6NIU2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC-0.48□□□□□ -2.49
LINC01549A6NIU2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.49□□□□□ -2.49
LINC01549A6NIU2 RNU6-302P-201ENST00000365249 107 ntBASIC-0.49□□□□□ -2.49
LINC01549A6NIU2 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.49□□□□□ -2.49
LINC01549A6NIU2 RNU6-921P-201ENST00000384361 107 ntBASIC-0.49□□□□□ -2.49
LINC01549A6NIU2 MIR140-201ENST00000385282 100 ntBASIC-0.49□□□□□ -2.49
LINC01549A6NIU2 AC244098.3-201ENST00000424803 96 ntBASIC-0.49□□□□□ -2.49
LINC01549A6NIU2 AC011005.2-201ENST00000487324 359 ntBASIC-0.49□□□□□ -2.49
LINC01549A6NIU2 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC-0.49□□□□□ -2.49
LINC01549A6NIU2 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.49□□□□□ -2.49
LINC01549A6NIU2 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC-0.49□□□□□ -2.49
LINC01549A6NIU2 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.49□□□□□ -2.49
LINC01549A6NIU2 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.49□□□□□ -2.49
LINC01549A6NIU2 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 SNORD114-26-201ENST00000363543 72 ntBASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 Y_RNA.224-201ENST00000364308 111 ntBASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 MIR644A-201ENST00000385262 94 ntBASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 RPS3AP36-201ENST00000398190 775 ntBASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 RNA5SP222-201ENST00000411039 105 ntBASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 AC243964.1-201ENST00000441814 261 ntBASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 SNRPGP9-201ENST00000456025 225 ntBASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 RPS26P48-201ENST00000491713 339 ntBASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 HMGB1P30-201ENST00000492455 606 ntBASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 AC093259.1-201ENST00000509755 300 ntBASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 RNA5SP490-201ENST00000517141 136 ntBASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 RN7SKP258-201ENST00000517151 304 ntBASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 AC010620.1-201ENST00000601088 1102 ntBASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 AL355816.2-201ENST00000610049 647 ntBASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 AC021506.2-201ENST00000612354 169 ntBASIC-0.5□□□□□ -2.49
LINC01549A6NIU2 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.51□□□□□ -2.49
LINC01549A6NIU2 MIR330-201ENST00000362196 94 ntBASIC-0.51□□□□□ -2.49
LINC01549A6NIU2 AC138623.1-201ENST00000418060 216 ntBASIC-0.51□□□□□ -2.49
LINC01549A6NIU2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.51□□□□□ -2.49
LINC01549A6NIU2 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC-0.51□□□□□ -2.49
LINC01549A6NIU2 RPL39P38-201ENST00000467018 153 ntBASIC-0.51□□□□□ -2.49
LINC01549A6NIU2 RPF2P2-201ENST00000504693 896 ntBASIC-0.51□□□□□ -2.49
LINC01549A6NIU2 MTCYBP40-201ENST00000509390 1135 ntBASIC-0.51□□□□□ -2.49
LINC01549A6NIU2 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC-0.51□□□□□ -2.49
LINC01549A6NIU2 AC135803.1-201ENST00000608748 565 ntBASIC-0.51□□□□□ -2.49
LINC01549A6NIU2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.51□□□□□ -2.49
LINC01549A6NIU2 AP005212.4-201ENST00000614206 710 ntBASIC-0.51□□□□□ -2.49
LINC01549A6NIU2 AC018926.1-201ENST00000616335 435 ntBASIC-0.51□□□□□ -2.49
LINC01549A6NIU2 MIR6734-201ENST00000621166 68 ntBASIC-0.51□□□□□ -2.49
LINC01549A6NIU2 AC097372.5-201ENST00000623665 376 ntBASIC-0.51□□□□□ -2.49
LINC01549A6NIU2 AL109659.3-201ENST00000624985 950 ntBASIC-0.51□□□□□ -2.49
LINC01549A6NIU2 AL157786.1-207ENST00000627771 695 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms