Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 RNU5F-6P-201ENST00000362979 116 ntBASIC1.96□□□□□ -2.1
CLRN2A0PK11 SNORD113-6-201ENST00000363345 75 ntBASIC1.96□□□□□ -2.1
CLRN2A0PK11 RNU6-529P-201ENST00000363383 104 ntBASIC1.96□□□□□ -2.1
CLRN2A0PK11 RNU6-234P-201ENST00000365229 104 ntBASIC1.96□□□□□ -2.1
CLRN2A0PK11 RNU6-546P-201ENST00000383991 107 ntBASIC1.96□□□□□ -2.1
CLRN2A0PK11 RNU6-611P-201ENST00000384276 104 ntBASIC1.96□□□□□ -2.1
CLRN2A0PK11 MIR10A-201ENST00000385043 110 ntBASIC1.96□□□□□ -2.1
CLRN2A0PK11 RNA5SP465-201ENST00000391195 109 ntBASIC1.96□□□□□ -2.1
CLRN2A0PK11 RNA5SP212-201ENST00000391223 107 ntBASIC1.96□□□□□ -2.1
CLRN2A0PK11 AC007283.2-201ENST00000424739 197 ntBASIC1.96□□□□□ -2.1
CLRN2A0PK11 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.96□□□□□ -2.1
CLRN2A0PK11 AC010587.1-201ENST00000505809 469 ntBASIC1.96□□□□□ -2.1
CLRN2A0PK11 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
CLRN2A0PK11 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.96□□□□□ -2.1
CLRN2A0PK11 AP003392.2-201ENST00000527269 208 ntBASIC1.96□□□□□ -2.1
CLRN2A0PK11 AP003181.2-201ENST00000528941 181 ntBASIC1.96□□□□□ -2.1
CLRN2A0PK11 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.96□□□□□ -2.1
CLRN2A0PK11 AC103987.3-201ENST00000582071 292 ntBASIC1.96□□□□□ -2.1
CLRN2A0PK11 MIR3935-201ENST00000583472 104 ntBASIC1.96□□□□□ -2.1
CLRN2A0PK11 BNIP3P25-201ENST00000596023 559 ntBASIC1.96□□□□□ -2.1
CLRN2A0PK11 AC012360.2-201ENST00000609349 391 ntBASIC1.96□□□□□ -2.1
CLRN2A0PK11 uc_338.5-201ENST00000611839 155 ntBASIC1.96□□□□□ -2.1
CLRN2A0PK11 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
CLRN2A0PK11 DUXAP9-208ENST00000622815 614 ntBASIC1.96□□□□□ -2.1
CLRN2A0PK11 SNORD3E-201ENST00000362899 217 ntBASIC1.95□□□□□ -2.1
CLRN2A0PK11 Y_RNA.122-201ENST00000363331 96 ntBASIC1.95□□□□□ -2.1
CLRN2A0PK11 RNU6-1274P-201ENST00000384557 107 ntBASIC1.95□□□□□ -2.1
CLRN2A0PK11 CISD1P1-201ENST00000393907 327 ntBASIC1.95□□□□□ -2.1
CLRN2A0PK11 AC114491.1-201ENST00000416095 246 ntBASIC1.95□□□□□ -2.1
CLRN2A0PK11 AC137499.1-201ENST00000427602 88 ntBASIC1.95□□□□□ -2.1
CLRN2A0PK11 AL365184.2-201ENST00000431139 435 ntBASIC1.95□□□□□ -2.1
CLRN2A0PK11 AL365400.1-201ENST00000431854 640 ntBASIC1.95□□□□□ -2.1
CLRN2A0PK11 AL606662.1-201ENST00000445763 553 ntBASIC1.95□□□□□ -2.1
CLRN2A0PK11 NDUFB1P2-201ENST00000449477 176 ntBASIC1.95□□□□□ -2.1
CLRN2A0PK11 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.95□□□□□ -2.1
CLRN2A0PK11 RNU6-123P-201ENST00000516163 102 ntBASIC1.95□□□□□ -2.1
CLRN2A0PK11 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.95□□□□□ -2.1
CLRN2A0PK11 SNORD53B-201ENST00000577887 78 ntBASIC1.95□□□□□ -2.1
CLRN2A0PK11 AL138889.2-201ENST00000603883 242 ntBASIC1.95□□□□□ -2.1
CLRN2A0PK11 AL359999.1-201ENST00000604513 294 ntBASIC1.95□□□□□ -2.1
CLRN2A0PK11 AP002360.4-201ENST00000606980 481 ntBASIC1.95□□□□□ -2.1
CLRN2A0PK11 AC027807.2-201ENST00000616099 408 ntBASIC1.95□□□□□ -2.1
CLRN2A0PK11 AL359314.1-201ENST00000616913 261 ntBASIC1.95□□□□□ -2.1
CLRN2A0PK11 AC068787.1-201ENST00000623908 691 ntBASIC1.95□□□□□ -2.1
CLRN2A0PK11 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CLRN2A0PK11 Y_RNA.40-201ENST00000362645 93 ntBASIC1.94□□□□□ -2.1
CLRN2A0PK11 RNU6-1210P-201ENST00000363775 107 ntBASIC1.94□□□□□ -2.1
CLRN2A0PK11 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.94□□□□□ -2.1
CLRN2A0PK11 SNORD116-20-201ENST00000384529 92 ntBASIC1.94□□□□□ -2.1
CLRN2A0PK11 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CLRN2A0PK11 RNA5SP111-201ENST00000411386 101 ntBASIC1.94□□□□□ -2.1
CLRN2A0PK11 AC004965.1-201ENST00000413033 213 ntBASIC1.94□□□□□ -2.1
CLRN2A0PK11 ELOCP4-201ENST00000420090 333 ntBASIC1.94□□□□□ -2.1
CLRN2A0PK11 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.94□□□□□ -2.1
CLRN2A0PK11 MTCO3P5-201ENST00000433620 714 ntBASIC1.94□□□□□ -2.1
CLRN2A0PK11 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.94□□□□□ -2.1
CLRN2A0PK11 AC006026.2-201ENST00000457376 180 ntBASIC1.94□□□□□ -2.1
CLRN2A0PK11 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.94□□□□□ -2.1
CLRN2A0PK11 AC112206.3-201ENST00000514578 389 ntBASIC1.94□□□□□ -2.1
CLRN2A0PK11 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.94□□□□□ -2.1
CLRN2A0PK11 AC015720.1-201ENST00000565251 277 ntBASIC1.94□□□□□ -2.1
CLRN2A0PK11 MIR548AC-201ENST00000585049 88 ntBASIC1.94□□□□□ -2.1
CLRN2A0PK11 RNU6-87P-201ENST00000607561 108 ntBASIC1.94□□□□□ -2.1
CLRN2A0PK11 AP000240.1-201ENST00000609910 452 ntBASIC1.94□□□□□ -2.1
CLRN2A0PK11 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.94□□□□□ -2.1
CLRN2A0PK11 SCARNA4-202ENST00000625402 129 ntBASIC1.94□□□□□ -2.1
CLRN2A0PK11 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CLRN2A0PK11 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CLRN2A0PK11 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CLRN2A0PK11 RNU6-1214P-201ENST00000363650 109 ntBASIC1.93□□□□□ -2.1
CLRN2A0PK11 RNU6-60P-201ENST00000364792 103 ntBASIC1.93□□□□□ -2.1
CLRN2A0PK11 RNU6-641P-201ENST00000384006 107 ntBASIC1.93□□□□□ -2.1
CLRN2A0PK11 RNU6-622P-201ENST00000384272 103 ntBASIC1.93□□□□□ -2.1
CLRN2A0PK11 RNU6-39P-201ENST00000384344 107 ntBASIC1.93□□□□□ -2.1
CLRN2A0PK11 RNU6-1179P-201ENST00000384667 107 ntBASIC1.93□□□□□ -2.1
CLRN2A0PK11 AP000275.1-201ENST00000411943 390 ntBASIC1.93□□□□□ -2.1
CLRN2A0PK11 CALM1P1-201ENST00000442082 433 ntBASIC1.93□□□□□ -2.1
CLRN2A0PK11 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.93□□□□□ -2.1
CLRN2A0PK11 RNA5SP57-201ENST00000459463 123 ntBASIC1.93□□□□□ -2.1
CLRN2A0PK11 AL121594.1-201ENST00000475906 575 ntBASIC1.93□□□□□ -2.1
CLRN2A0PK11 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.93□□□□□ -2.1
CLRN2A0PK11 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CLRN2A0PK11 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.93□□□□□ -2.1
CLRN2A0PK11 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.93□□□□□ -2.1
CLRN2A0PK11 AC245884.10-201ENST00000597355 337 ntBASIC1.93□□□□□ -2.1
CLRN2A0PK11 CLIC4P2-201ENST00000601934 717 ntBASIC1.93□□□□□ -2.1
CLRN2A0PK11 AC012065.4-201ENST00000602445 679 ntBASIC1.93□□□□□ -2.1
CLRN2A0PK11 Z82243.1-201ENST00000609432 473 ntBASIC1.93□□□□□ -2.1
CLRN2A0PK11 AC004908.3-201ENST00000610248 625 ntBASIC1.93□□□□□ -2.1
CLRN2A0PK11 AC093648.1-201ENST00000623546 606 ntBASIC1.93□□□□□ -2.1
CLRN2A0PK11 AC006927.3-201ENST00000638789 384 ntBASIC1.93□□□□□ -2.1
CLRN2A0PK11 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.93□□□□□ -2.1
CLRN2A0PK11 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.92□□□□□ -2.1
CLRN2A0PK11 AL391987.6-201ENST00000305671 199 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 OR4G2P-201ENST00000328113 903 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 RNU6-212P-201ENST00000362642 104 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 SNORD14B-201ENST00000364533 90 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CLRN2A0PK11 MIR489-201ENST00000384923 84 ntBASIC1.92□□□□□ -2.1
CLRN2A0PK11 RNU11-3P-201ENST00000391111 133 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms