Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AL031313.1-201ENST00000448435 256 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 snoU13.14-201ENST00000459372 104 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AL160236.1-201ENST00000556317 195 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 SUB1P3-201ENST00000564581 315 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 BNIP3P40-201ENST00000596017 556 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AC012065.4-201ENST00000602445 679 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AC144521.1-201ENST00000607148 956 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AC018645.2-201ENST00000609151 472 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AC097478.2-201ENST00000610572 514 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 MIR8074-201ENST00000615081 81 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AL157834.3-201ENST00000615543 103 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AL049777.1-201ENST00000622740 518 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AC093648.1-201ENST00000623546 606 ntBASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
TRAV41A0A0B4J266 AP000560.1-201ENST00000624150 1937 ntBASIC1.03□□□□□ -2.25
TRAV41A0A0B4J266 HAUS6P2-201ENST00000433254 2404 ntBASIC1.03□□□□□ -2.25
TRAV41A0A0B4J266 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 MIR412-201ENST00000362142 91 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 RNA5SP432-201ENST00000362480 116 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 RNU6-1210P-201ENST00000363775 107 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 RNU6-743P-201ENST00000364151 106 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 RNU6-384P-201ENST00000364900 104 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 RNU6-157P-201ENST00000383957 107 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 SNORD116-20-201ENST00000384529 92 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 RNU6-636P-201ENST00000384598 107 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 MIR10A-201ENST00000385043 110 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 SNORA48.1-201ENST00000390879 135 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 CBX3P9-201ENST00000402326 552 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 USP9YP18-201ENST00000425912 695 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 AL627311.1-201ENST00000431514 115 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 RPL23AP30-201ENST00000432419 501 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 AL590365.1-201ENST00000450788 243 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 AL445523.1-201ENST00000451184 1362 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 AL163540.1-201ENST00000485382 386 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 RNVU1-2-201ENST00000516326 135 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 Y_RNA.687-201ENST00000516558 91 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 RNU6-201P-201ENST00000517100 61 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 RN7SKP256-201ENST00000517201 314 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 AL356057.1-201ENST00000533798 831 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 AC018630.3-201ENST00000542637 96 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 AC008269.2-201ENST00000561915 1105 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 MIR3118-1-201ENST00000581787 76 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 DEFB131E-202ENST00000602581 683 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 AC174048.1-201ENST00000603389 144 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 MIR1248-201ENST00000629190 106 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 AC103706.2-201ENST00000638080 240 ntBASIC1.02□□□□□ -2.25
TRAV41A0A0B4J266 ZNF29P-201ENST00000225587 168 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 AL391987.6-201ENST00000305671 199 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 snoU2_19.1-201ENST00000362361 80 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 RNU6-212P-201ENST00000362642 104 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 RNU6-931P-201ENST00000363850 107 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 Y_RNA.302-201ENST00000364997 102 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 RNU6-83P-201ENST00000384568 112 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 MIR150-201ENST00000385048 84 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 RNA5SP100-201ENST00000410903 110 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 RNA5SP59-201ENST00000410922 110 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 RPL22P18-201ENST00000417197 377 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 MTND1P20-201ENST00000430341 950 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 AC245517.4-201ENST00000448601 281 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 NDUFB1P2-201ENST00000449477 176 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 AC005908.1-201ENST00000468701 347 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 RPL30P6-201ENST00000475925 342 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 AC004223.1-201ENST00000479840 271 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 AC099513.1-201ENST00000490423 301 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 AC022616.6-201ENST00000520479 119 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 AP003033.1-201ENST00000527244 415 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms