Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RNA5SP490-201ENST00000517141 136 ntBASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 DEFB108E-201ENST00000524692 240 ntBASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 AC080078.3-201ENST00000605407 463 ntBASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 AP001033.2-201ENST00000609701 1003 ntBASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 AC006213.5-201ENST00000619673 288 ntBASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 AC099654.9-201ENST00000637055 678 ntBASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 MIR3529-201ENST00000637713 78 ntBASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 RNU4-82P-201ENST00000362443 140 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-1019P-201ENST00000364424 107 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 SNORD115-48-201ENST00000364764 76 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 SUGT1P1-201ENST00000379514 476 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-432P-201ENST00000384196 109 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 MIR217-201ENST00000384817 110 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 MTND1P21-201ENST00000412991 285 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 UBE2V1P10-201ENST00000414685 269 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 RPS15AP10-201ENST00000432472 382 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 COX7BP2-201ENST00000437976 242 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 MTCYBP1-201ENST00000454315 1119 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 RNU7-95P-201ENST00000459222 64 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 RPL39P38-201ENST00000467018 153 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 HMGB1P30-201ENST00000492455 606 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 AC113410.1-201ENST00000505029 247 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 AC022493.2-201ENST00000506122 481 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 AC108078.2-201ENST00000510750 236 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-113P-201ENST00000516653 101 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 RN7SKP258-201ENST00000517151 304 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 AL442163.3-201ENST00000554110 156 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 AC090330.1-201ENST00000588646 764 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 VN1R80P-201ENST00000597126 338 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 KC877982.1-201ENST00000602313 470 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 AL391001.1-201ENST00000602747 715 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 AC092106.3-201ENST00000611308 722 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 AC004777.1-201ENST00000624317 287 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 IGHVIII-44-202ENST00000636235 289 ntBASIC0.05□□□□□ -2.4
LINC01558Q9Y6Z2 AC090625.1-201ENST00000357130 210 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 U8.2-201ENST00000363156 134 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-1066P-201ENST00000363573 105 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-487P-201ENST00000365430 104 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 Y_RNA.363-201ENST00000365529 113 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-843P-201ENST00000384454 104 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 AF228730.1-201ENST00000397972 663 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 MTCO1P56-201ENST00000401674 224 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-1054P-201ENST00000411293 104 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 TPTE2P1-204ENST00000435256 593 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 AC245047.7-201ENST00000440265 293 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 AL831737.1-201ENST00000441288 271 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 AC233266.1-201ENST00000454518 96 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 snoU13.14-201ENST00000459372 104 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 MTND1P3-201ENST00000484956 952 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 AC105758.1-201ENST00000506038 399 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 AC009902.1-201ENST00000519351 183 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 MIR4444-1-201ENST00000581696 74 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 MIR4444-2-201ENST00000584390 74 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 MIR3976-201ENST00000606807 139 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 AC242852.1-201ENST00000612151 96 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 AC063943.3-201ENST00000615562 356 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 RMST_10.1-201ENST00000616309 154 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 AC244015.1-201ENST00000622301 99 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.04□□□□□ -2.4
LINC01558Q9Y6Z2 MIRLET7D-201ENST00000362263 87 ntBASIC0.03□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-1080P-201ENST00000383982 107 ntBASIC0.03□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-114P-201ENST00000384704 105 ntBASIC0.03□□□□□ -2.4
LINC01558Q9Y6Z2 RNU2-23P-201ENST00000410545 195 ntBASIC0.03□□□□□ -2.4
LINC01558Q9Y6Z2 COX6CP10-201ENST00000416832 224 ntBASIC0.03□□□□□ -2.4
LINC01558Q9Y6Z2 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.03□□□□□ -2.4
LINC01558Q9Y6Z2 AC092427.1-201ENST00000439177 601 ntBASIC0.03□□□□□ -2.4
LINC01558Q9Y6Z2 MTND1P30-201ENST00000441241 901 ntBASIC0.03□□□□□ -2.4
LINC01558Q9Y6Z2 AL163540.1-201ENST00000485382 386 ntBASIC0.03□□□□□ -2.4
LINC01558Q9Y6Z2 AC108740.1-201ENST00000498629 225 ntBASIC0.03□□□□□ -2.4
LINC01558Q9Y6Z2 AC009646.1-201ENST00000510455 318 ntBASIC0.03□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-229P-201ENST00000516614 102 ntBASIC0.03□□□□□ -2.4
LINC01558Q9Y6Z2 AC087276.1-201ENST00000529659 480 ntBASIC0.03□□□□□ -2.4
LINC01558Q9Y6Z2 BNIP3P6-201ENST00000549284 499 ntBASIC0.03□□□□□ -2.4
LINC01558Q9Y6Z2 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms