Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC002076.2-201ENST00000617362 122 ntBASIC2.97□□□□□ -1.93
RAI2Q9Y5P3 AC126177.8-201ENST00000618339 1015 ntBASIC2.97□□□□□ -1.93
RAI2Q9Y5P3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.97□□□□□ -1.93
RAI2Q9Y5P3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.97□□□□□ -1.93
RAI2Q9Y5P3 SNORA50A-202ENST00000629536 136 ntBASIC2.97□□□□□ -1.93
RAI2Q9Y5P3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
RAI2Q9Y5P3 ZNF519P1-201ENST00000449011 1626 ntBASIC2.97□□□□□ -1.93
RAI2Q9Y5P3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.97□□□□□ -1.93
RAI2Q9Y5P3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
RAI2Q9Y5P3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 AC093831.2-201ENST00000624393 3427 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 AP006437.1-201ENST00000641440 3685 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 SNORD3E-201ENST00000362899 217 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 Y_RNA.259-201ENST00000364619 101 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 RNU6-217P-201ENST00000384164 104 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 SNORA1.3-201ENST00000384676 136 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 MIR10A-201ENST00000385043 110 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 AL356057.2-201ENST00000403318 432 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 RNU2-3P-201ENST00000410144 191 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 RN7SKP158-201ENST00000410453 326 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 AC098614.2-201ENST00000426040 255 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 SNRPEP4-201ENST00000435815 279 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 RPL37P4-201ENST00000448908 268 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 NDUFB1P2-201ENST00000449477 176 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 AL109933.2-201ENST00000452651 260 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 AL135752.1-201ENST00000479477 471 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 AC011005.2-201ENST00000487324 359 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 MTND5P5-201ENST00000503764 376 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 AC096745.1-201ENST00000509945 370 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 SCGB1D5P-201ENST00000515134 247 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 RNU1-86P-201ENST00000516108 154 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 RNU1-107P-201ENST00000516617 154 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 RNU1-54P-201ENST00000517181 120 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 AC009902.1-201ENST00000519351 183 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 FRG2DP-202ENST00000566967 323 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 AC044792.1-201ENST00000593294 196 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 AL050343.2-201ENST00000607338 280 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 FTX_3.1-201ENST00000610451 147 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 AL590808.1-201ENST00000618696 141 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 AL160413.1-201ENST00000622780 310 ntBASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.96□□□□□ -1.94
RAI2Q9Y5P3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 Y_RNA.135-201ENST00000363439 95 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 Y_RNA.339-201ENST00000365325 102 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 SNORA75B-201ENST00000384053 137 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 RNU6-601P-201ENST00000384540 107 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 SNORA40C-201ENST00000391285 128 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 RNU6-370P-201ENST00000411008 104 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 CYCSP33-201ENST00000414485 327 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 PGBD4P6-201ENST00000421501 610 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 UBE2V1P4-201ENST00000425374 344 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 SAR1AP4-201ENST00000429225 591 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 AC105272.1-201ENST00000438604 198 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 BRK1P2-201ENST00000442875 223 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 MTND1P17-201ENST00000448961 204 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 snoU13.15-201ENST00000459407 104 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 RPL30P14-201ENST00000482744 348 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 RNA5SP380-201ENST00000517190 98 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 AP002770.2-201ENST00000543613 532 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 AC107016.2-201ENST00000547968 190 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 AL158827.2-201ENST00000602494 330 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 AL133215.3-201ENST00000609801 448 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 MIR6128-201ENST00000615528 109 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 MIR6076-201ENST00000617521 113 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 AC073308.1-201ENST00000623696 305 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 AL691447.3-201ENST00000635020 330 ntBASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
RAI2Q9Y5P3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
RAI2Q9Y5P3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RAI2Q9Y5P3 RNA5SP295-201ENST00000362655 121 ntBASIC2.94□□□□□ -1.94
RAI2Q9Y5P3 SNORD14B-201ENST00000364533 90 ntBASIC2.94□□□□□ -1.94
RAI2Q9Y5P3 Y_RNA.315-201ENST00000365117 102 ntBASIC2.94□□□□□ -1.94
RAI2Q9Y5P3 SNORA9.2-201ENST00000365361 133 ntBASIC2.94□□□□□ -1.94
RAI2Q9Y5P3 RNU6-1035P-201ENST00000384477 107 ntBASIC2.94□□□□□ -1.94
RAI2Q9Y5P3 RNU6-658P-201ENST00000384606 106 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms