Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 USMG5P1-201ENST00000425964 177 ntBASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 AC146507.2-201ENST00000460608 476 ntBASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 RPL7P42-201ENST00000481005 679 ntBASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 PHBP14-201ENST00000512887 367 ntBASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 ACA59.1-201ENST00000515966 143 ntBASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 AC245166.1-201ENST00000521012 253 ntBASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 AL121821.2-201ENST00000556081 394 ntBASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 MIR3944-201ENST00000581277 108 ntBASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 AC005899.2-201ENST00000584353 90 ntBASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 AC011890.2-201ENST00000613393 294 ntBASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 AC093831.2-201ENST00000624393 3427 ntBASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.39□□□□□ -1.87
PCDHA3Q9Y5H8 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 Y_RNA.473-201ENST00000384333 102 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 SNORA75.6-201ENST00000391318 127 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 SNORA48.8-201ENST00000391324 134 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 FTH1P15-201ENST00000406984 280 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 RPS29P4-201ENST00000414733 161 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 YME1L1P1-201ENST00000429435 297 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 AC091286.1-201ENST00000431233 461 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 RPS15AP5-201ENST00000436276 388 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 AC124916.1-201ENST00000444020 547 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 AC133134.1-201ENST00000466800 359 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 MRPL42P6-201ENST00000486397 371 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-581P-201ENST00000516214 105 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-307P-201ENST00000516743 106 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 SNORD19.2-201ENST00000516978 73 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 ANP32BP3-201ENST00000559213 706 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 BNIP3P16-201ENST00000589779 534 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 AC020895.1-201ENST00000595362 272 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 MIR8076-201ENST00000611401 83 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 AC090617.7-201ENST00000623952 126 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 MTCO1P12-201ENST00000414273 1543 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 AC093908.1-201ENST00000623125 8092 ntBASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHA3Q9Y5H8 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 SNORA71.3-201ENST00000362582 128 ntBASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-527P-201ENST00000363425 104 ntBASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-1059P-201ENST00000363752 98 ntBASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 AL365496.1-201ENST00000426885 215 ntBASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 AC006946.1-201ENST00000429106 328 ntBASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 HMGN2P13-201ENST00000476476 274 ntBASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-612P-201ENST00000516909 102 ntBASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 SNORA31.21-201ENST00000517180 77 ntBASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 AC022634.1-201ENST00000520765 532 ntBASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 AP005902.1-201ENST00000521358 186 ntBASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 AC020661.2-201ENST00000560114 134 ntBASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 MIR4276-201ENST00000584832 70 ntBASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 AC078795.3-201ENST00000602913 472 ntBASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 AL162713.1-201ENST00000604480 262 ntBASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 AC019176.2-201ENST00000611579 315 ntBASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHA3Q9Y5H8 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 MIR369-201ENST00000362155 70 ntBASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 Y_RNA.2-201ENST00000362330 96 ntBASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 SNORA14A-201ENST00000364773 135 ntBASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-1040P-201ENST00000383974 107 ntBASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 RNU6-890P-201ENST00000384121 107 ntBASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 SNORD116-20-201ENST00000384529 92 ntBASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 SNORA41-201ENST00000384675 132 ntBASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 AL591034.2-201ENST00000402839 359 ntBASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 HMGN2P31-201ENST00000432430 273 ntBASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 AL591043.1-201ENST00000432461 424 ntBASIC3.36□□□□□ -1.87
PCDHA3Q9Y5H8 AC091153.1-201ENST00000466297 402 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms