Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC073539.2-201ENST00000597113 165 ntBASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 SNORD14A-201ENST00000606526 91 ntBASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 SCARNA4-202ENST00000625402 129 ntBASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU6-858P-201ENST00000362436 107 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 SNORD114-19-201ENST00000363072 75 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 SNORA25.6-201ENST00000364121 118 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU6-487P-201ENST00000365430 104 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU6-72P-201ENST00000384285 79 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU6-45P-201ENST00000384471 107 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 AL359511.1-201ENST00000402970 211 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 RN7SKP158-201ENST00000410453 326 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU4-55P-201ENST00000410731 137 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU6-607P-201ENST00000411283 108 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 AL353193.1-201ENST00000421444 268 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 DPH3P2-201ENST00000422618 250 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 EIF4EP4-201ENST00000424916 578 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 AL669831.1-202ENST00000428504 417 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 AL365400.1-201ENST00000431854 640 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 GTF2IP13-201ENST00000438487 386 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 DNAJC19P4-201ENST00000440115 345 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 AP000705.1-201ENST00000454567 350 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 AC027673.1-201ENST00000456245 405 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 snoU109.2-201ENST00000459316 135 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 RN7SL636P-201ENST00000497504 294 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 AC008526.1-201ENST00000509149 338 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 MTND3P25-201ENST00000509243 135 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 AF213884.2-201ENST00000510417 903 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 AP003034.1-201ENST00000534621 422 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 CR383656.8-201ENST00000549046 145 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 AGGF1P4-201ENST00000568249 801 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 MYL12BP1-201ENST00000569826 507 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 MIR1273D-201ENST00000577266 86 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 MIR3670-2-201ENST00000582974 65 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 MIR3670-1-201ENST00000584160 65 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 MIR3670-3-201ENST00000584855 65 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 MIR3670-4-201ENST00000612260 65 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 RMST_4.1-201ENST00000616886 107 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU6-942P-201ENST00000363002 107 ntBASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU6-715P-201ENST00000365204 103 ntBASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU6-1158P-201ENST00000391167 107 ntBASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 AC068050.1-201ENST00000394891 380 ntBASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 FTH1P15-201ENST00000406984 280 ntBASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 RAP1BP3-201ENST00000407180 549 ntBASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 DLGAP5P1-201ENST00000430307 464 ntBASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 AC124916.1-201ENST00000444020 547 ntBASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 AC011005.2-201ENST00000487324 359 ntBASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 MTCO3P9-201ENST00000506989 781 ntBASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 LRRC34P2-201ENST00000514850 553 ntBASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU6-1178P-201ENST00000516674 107 ntBASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 RNA5SP82-201ENST00000516707 92 ntBASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 MTATP6P3-201ENST00000581686 676 ntBASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 AP001596.2-201ENST00000608410 312 ntBASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 AC011890.2-201ENST00000613393 294 ntBASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 AC008121.3-201ENST00000618726 433 ntBASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 AC073534.2-201ENST00000620377 381 ntBASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
PCDHGA1Q9Y5H4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 OR4G2P-201ENST00000328113 903 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU4-75P-201ENST00000364621 146 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 Y_RNA.318-201ENST00000365131 97 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 MIR144-201ENST00000384886 86 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU6-903P-201ENST00000391270 109 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 AL591416.1-201ENST00000404015 867 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 BTF3P7-201ENST00000407097 488 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU2-3P-201ENST00000410144 191 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 VN1R108P-201ENST00000431580 830 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU7-63P-201ENST00000459054 62 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 DYNLL1P5-201ENST00000467158 270 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 SRIP1-201ENST00000489235 288 ntBASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.42□□□□□ -2.02
PCDHGA1Q9Y5H4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms