Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RN7SL52P-201ENST00000584271 284 ntBASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 AC099778.2-201ENST00000610904 211 ntBASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 RN7SL722P-201ENST00000617780 284 ntBASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 RN7SL565P-201ENST00000618246 284 ntBASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 U6.115-201ENST00000636045 103 ntBASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 SNORD98-201ENST00000636377 67 ntBASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PCDHB3Q9Y5E6 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
PCDHB3Q9Y5E6 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHB3Q9Y5E6 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHB3Q9Y5E6 AC063976.2-201ENST00000425667 3556 ntBASIC4.9□□□□□ -1.62
PCDHB3Q9Y5E6 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.9□□□□□ -1.62
PCDHB3Q9Y5E6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHB3Q9Y5E6 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.62
PCDHB3Q9Y5E6 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.9□□□□□ -1.62
PCDHB3Q9Y5E6 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHB3Q9Y5E6 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.9□□□□□ -1.62
PCDHB3Q9Y5E6 RNU1-64P-201ENST00000365443 163 ntBASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 RNU6-49P-201ENST00000384256 107 ntBASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 MIR1271-201ENST00000408537 86 ntBASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 RNA5SP390-201ENST00000410191 113 ntBASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 AC004866.1-201ENST00000411748 78 ntBASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 TOMM22P2-201ENST00000430735 237 ntBASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 RN7SL860P-201ENST00000473738 223 ntBASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 AC012468.1-201ENST00000604888 430 ntBASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 AC025166.1-201ENST00000612411 163 ntBASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 MIR548AY-201ENST00000617669 107 ntBASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 AC068205.3-201ENST00000636385 468 ntBASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHB3Q9Y5E6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 NOL8P1-201ENST00000508336 3529 ntBASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 RN7SKP104-201ENST00000362605 328 ntBASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 RNU6-1280P-201ENST00000365211 107 ntBASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 RNU6-217P-201ENST00000384164 104 ntBASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 AL603914.1-201ENST00000401964 204 ntBASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 SNORA36B-201ENST00000410438 131 ntBASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 RNA5SP504-201ENST00000410676 117 ntBASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 TOMM22P1-201ENST00000418578 312 ntBASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 AC012308.1-201ENST00000451232 178 ntBASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 AC117454.1-201ENST00000491120 168 ntBASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 Y_RNA.690-201ENST00000516603 95 ntBASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 RNU6-344P-201ENST00000516635 111 ntBASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 RNU6-197P-201ENST00000516680 100 ntBASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 MIR4330-201ENST00000579077 105 ntBASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 AC131055.1-201ENST00000584626 316 ntBASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 AP001318.4-201ENST00000616637 121 ntBASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
PCDHB3Q9Y5E6 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 RN7SKP113-201ENST00000363891 295 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 RN7SKP280-201ENST00000364196 304 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 RNU6-335P-201ENST00000364563 113 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 SNORA56-201ENST00000383966 129 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 RNU6-622P-201ENST00000384272 103 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 RNU6-136P-201ENST00000384663 107 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 CBX3P9-201ENST00000402326 552 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 AC016397.1-201ENST00000412463 242 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 BX510359.2-201ENST00000417920 305 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 RPL36AP10-201ENST00000421785 322 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 AL691449.1-201ENST00000426570 421 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 snoU13.24-201ENST00000458998 104 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 RN7SL738P-201ENST00000470264 297 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 AC140172.1-201ENST00000502928 141 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 COX6B1P5-201ENST00000509843 249 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 SNORA31.8-201ENST00000516327 108 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 RNU7-115P-201ENST00000516433 55 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms