Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.34□□□□□ -2.19
CHTOPQ9Y3Y2 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.34□□□□□ -2.19
CHTOPQ9Y3Y2 AC019288.1-201ENST00000557918 224 ntBASIC1.34□□□□□ -2.19
CHTOPQ9Y3Y2 MIR5089-201ENST00000580047 84 ntBASIC1.34□□□□□ -2.19
CHTOPQ9Y3Y2 AC103987.3-201ENST00000582071 292 ntBASIC1.34□□□□□ -2.19
CHTOPQ9Y3Y2 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CHTOPQ9Y3Y2 BNIP3P39-201ENST00000601077 554 ntBASIC1.34□□□□□ -2.19
CHTOPQ9Y3Y2 AL158050.2-201ENST00000605336 568 ntBASIC1.34□□□□□ -2.19
CHTOPQ9Y3Y2 AC024933.1-201ENST00000608472 348 ntBASIC1.34□□□□□ -2.19
CHTOPQ9Y3Y2 AL391813.2-201ENST00000609113 322 ntBASIC1.34□□□□□ -2.19
CHTOPQ9Y3Y2 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.34□□□□□ -2.19
CHTOPQ9Y3Y2 AP003485.2-201ENST00000623636 610 ntBASIC1.34□□□□□ -2.19
CHTOPQ9Y3Y2 AC120349.3-201ENST00000624377 529 ntBASIC1.34□□□□□ -2.19
CHTOPQ9Y3Y2 AC103706.2-201ENST00000638080 240 ntBASIC1.34□□□□□ -2.19
CHTOPQ9Y3Y2 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.34□□□□□ -2.2
CHTOPQ9Y3Y2 MTND4P16-201ENST00000466108 1367 ntBASIC1.34□□□□□ -2.2
CHTOPQ9Y3Y2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 RPS20P2-201ENST00000402520 389 ntBASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 AL139156.1-201ENST00000412785 841 ntBASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 MTND4P20-201ENST00000424125 869 ntBASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 JTBP1-201ENST00000441314 247 ntBASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 MTND2P4-201ENST00000445034 1004 ntBASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 AL122001.1-201ENST00000457027 370 ntBASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 AC079140.2-201ENST00000506193 142 ntBASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 SUMO2P18-201ENST00000518873 252 ntBASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 IGKV3-31-201ENST00000523109 329 ntBASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 MIR3618-201ENST00000580330 88 ntBASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 AC069431.2-201ENST00000604149 1099 ntBASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 Y_RNA.783-201ENST00000613546 102 ntBASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 OR4G3P-201ENST00000633500 913 ntBASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 AL445984.1-201ENST00000637834 659 ntBASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CHTOPQ9Y3Y2 RNU6-925P-201ENST00000384629 104 ntBASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 RNU2-20P-201ENST00000410425 191 ntBASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 AC013410.2-201ENST00000422627 201 ntBASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 AC137499.1-201ENST00000427602 88 ntBASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 FTH1P25-201ENST00000447665 469 ntBASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 RNA5SP269-201ENST00000459032 137 ntBASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 snoU109.3-201ENST00000459477 145 ntBASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 RPL9P9-202ENST00000466501 579 ntBASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 AP000797.1-201ENST00000478870 387 ntBASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 RNU5F-2P-201ENST00000516066 82 ntBASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 SNRPGP18-201ENST00000553000 214 ntBASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 AC005668.1-201ENST00000571142 476 ntBASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 MIR4419B-201ENST00000577260 68 ntBASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 MIR3937-201ENST00000580135 106 ntBASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 AL139286.2-201ENST00000606838 396 ntBASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 AC012409.4-201ENST00000612923 249 ntBASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 MIR6852-201ENST00000621699 66 ntBASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 MIR6873-201ENST00000622788 63 ntBASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 AC243829.7-201ENST00000633081 225 ntBASIC1.32□□□□□ -2.2
CHTOPQ9Y3Y2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 RNA5SP289-201ENST00000362332 137 ntBASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 SNORD114-6-201ENST00000364393 72 ntBASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 Y_RNA.255-201ENST00000364581 97 ntBASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 RNU2-7P-201ENST00000410794 178 ntBASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 AC097473.1-201ENST00000508142 408 ntBASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 RNU6-123P-201ENST00000516163 102 ntBASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 SCARNA1-201ENST00000517138 166 ntBASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 AC022616.6-201ENST00000520479 119 ntBASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 AP005435.4-201ENST00000529514 284 ntBASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 AC011458.1-201ENST00000604034 617 ntBASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 AP002360.4-201ENST00000606980 481 ntBASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 AC010608.3-201ENST00000625048 527 ntBASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.31□□□□□ -2.2
CHTOPQ9Y3Y2 AC100821.1-201ENST00000523153 2479 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 RNU6-527P-201ENST00000363425 104 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 Y_RNA.332-201ENST00000365271 113 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 RNU5E-7P-201ENST00000365290 117 ntBASIC1.3□□□□□ -2.2
CHTOPQ9Y3Y2 Y_RNA.510-201ENST00000384511 114 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms