Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 RNU2-49P-201ENST00000410666 184 ntBASIC4.03□□□□□ -1.76
R3HCC1Q9Y3T6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.03□□□□□ -1.76
R3HCC1Q9Y3T6 AC007969.2-201ENST00000441891 191 ntBASIC4.03□□□□□ -1.76
R3HCC1Q9Y3T6 AL031659.1-201ENST00000447075 539 ntBASIC4.03□□□□□ -1.76
R3HCC1Q9Y3T6 AL031183.1-201ENST00000457667 207 ntBASIC4.03□□□□□ -1.76
R3HCC1Q9Y3T6 RNU7-23P-201ENST00000459465 62 ntBASIC4.03□□□□□ -1.76
R3HCC1Q9Y3T6 MED28P2-201ENST00000475771 317 ntBASIC4.03□□□□□ -1.76
R3HCC1Q9Y3T6 MIR2276-201ENST00000516886 89 ntBASIC4.03□□□□□ -1.76
R3HCC1Q9Y3T6 ACA59.2-201ENST00000517061 156 ntBASIC4.03□□□□□ -1.76
R3HCC1Q9Y3T6 SNORA31.23-201ENST00000517219 133 ntBASIC4.03□□□□□ -1.76
R3HCC1Q9Y3T6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.03□□□□□ -1.76
R3HCC1Q9Y3T6 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.03□□□□□ -1.76
R3HCC1Q9Y3T6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
R3HCC1Q9Y3T6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
R3HCC1Q9Y3T6 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
R3HCC1Q9Y3T6 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 ZNF299P-201ENST00000406845 1804 ntBASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 RNA5SP42-201ENST00000364278 115 ntBASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 Y_RNA.364-201ENST00000365532 101 ntBASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 RNU6-784P-201ENST00000384330 106 ntBASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 MRPL42P3-201ENST00000401492 326 ntBASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 RPL23AP22-201ENST00000437556 453 ntBASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 AL161651.1-201ENST00000440882 223 ntBASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 SNORA64.4-201ENST00000516632 81 ntBASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 SCARNA14-201ENST00000516903 136 ntBASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 AC009163.5-201ENST00000575421 637 ntBASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 MIR4680-201ENST00000580906 66 ntBASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 AC092447.9-201ENST00000603395 144 ntBASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
R3HCC1Q9Y3T6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 GABRG2-229ENST00000641017 3628 ntBASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 AC007256.1-201ENST00000392253 2765 ntBASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 RNU6-595P-201ENST00000363944 107 ntBASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 RNU1-140P-201ENST00000365040 165 ntBASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 MIR134-201ENST00000385258 73 ntBASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 PTMAP2-201ENST00000397627 327 ntBASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 AC245291.1-201ENST00000419501 328 ntBASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 AL445584.1-201ENST00000431451 330 ntBASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 AP001025.1-201ENST00000486139 332 ntBASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 AC092185.1-201ENST00000491371 97 ntBASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 AC091874.1-201ENST00000511402 339 ntBASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 SNORA25.10-201ENST00000515926 124 ntBASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 AC006130.2-201ENST00000586202 326 ntBASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 AC008737.2-201ENST00000599446 118 ntBASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 AL162730.1-201ENST00000605734 292 ntBASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 CR392039.5-201ENST00000623201 510 ntBASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
R3HCC1Q9Y3T6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 Y_RNA.80-201ENST00000362996 102 ntBASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 Y_RNA.145-201ENST00000363527 102 ntBASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 RNU1-115P-201ENST00000365329 160 ntBASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 Y_RNA.485-201ENST00000384395 102 ntBASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 Y_RNA.577-201ENST00000384794 101 ntBASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 BTF3L4P2-201ENST00000392798 346 ntBASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 RNU6-1156P-201ENST00000410365 100 ntBASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 AL035423.1-201ENST00000420331 213 ntBASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 HMGN1P18-201ENST00000457642 277 ntBASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 AC104027.1-201ENST00000521887 300 ntBASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 AC034105.4-201ENST00000568304 277 ntBASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 MIR5701-3-201ENST00000578890 82 ntBASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 MIR5701-1-201ENST00000585138 82 ntBASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 MIR5701-2-201ENST00000615634 82 ntBASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 AP000553.6-201ENST00000641242 118 ntBASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
R3HCC1Q9Y3T6 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms