Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AL031775.1-201ENST00000607014 887 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 AL365434.2-201ENST00000607979 234 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 MIR8087-201ENST00000612745 78 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 uc_338.15-201ENST00000615470 191 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 AC091925.1-201ENST00000623204 462 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 AC138627.2-201ENST00000624202 601 ntBASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.06□□□□□ -2.4
UBE2D4Q9Y2X8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
UBE2D4Q9Y2X8 RNA5SP493-201ENST00000364115 91 ntBASIC0.05□□□□□ -2.4
UBE2D4Q9Y2X8 Y_RNA.205-201ENST00000364128 113 ntBASIC0.05□□□□□ -2.4
UBE2D4Q9Y2X8 Y_RNA.476-201ENST00000384347 108 ntBASIC0.05□□□□□ -2.4
UBE2D4Q9Y2X8 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.05□□□□□ -2.4
UBE2D4Q9Y2X8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.05□□□□□ -2.4
UBE2D4Q9Y2X8 PSMA6P3-201ENST00000428242 164 ntBASIC0.05□□□□□ -2.4
UBE2D4Q9Y2X8 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.05□□□□□ -2.4
UBE2D4Q9Y2X8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.05□□□□□ -2.4
UBE2D4Q9Y2X8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.05□□□□□ -2.4
UBE2D4Q9Y2X8 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.05□□□□□ -2.4
UBE2D4Q9Y2X8 AK3P2-201ENST00000507976 429 ntBASIC0.05□□□□□ -2.4
UBE2D4Q9Y2X8 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.05□□□□□ -2.4
UBE2D4Q9Y2X8 MIR3169-201ENST00000578032 83 ntBASIC0.05□□□□□ -2.4
UBE2D4Q9Y2X8 AC002545.1-201ENST00000592511 181 ntBASIC0.05□□□□□ -2.4
UBE2D4Q9Y2X8 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.05□□□□□ -2.4
UBE2D4Q9Y2X8 AC023932.2-201ENST00000603176 175 ntBASIC0.05□□□□□ -2.4
UBE2D4Q9Y2X8 DUXAP11-201ENST00000603858 526 ntBASIC0.05□□□□□ -2.4
UBE2D4Q9Y2X8 AC069114.2-201ENST00000604699 304 ntBASIC0.05□□□□□ -2.4
UBE2D4Q9Y2X8 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
UBE2D4Q9Y2X8 SNORA63.3-201ENST00000362682 132 ntBASIC0.04□□□□□ -2.4
UBE2D4Q9Y2X8 RNU4-41P-201ENST00000364426 143 ntBASIC0.04□□□□□ -2.4
UBE2D4Q9Y2X8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
UBE2D4Q9Y2X8 RNU6-1237P-201ENST00000384777 107 ntBASIC0.04□□□□□ -2.4
UBE2D4Q9Y2X8 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.04□□□□□ -2.4
UBE2D4Q9Y2X8 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
UBE2D4Q9Y2X8 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.04□□□□□ -2.4
UBE2D4Q9Y2X8 MTND2P4-201ENST00000445034 1004 ntBASIC0.04□□□□□ -2.4
UBE2D4Q9Y2X8 CYCTP-201ENST00000504253 315 ntBASIC0.04□□□□□ -2.4
UBE2D4Q9Y2X8 AC105313.1-201ENST00000509121 353 ntBASIC0.04□□□□□ -2.4
UBE2D4Q9Y2X8 MTCYBP43-201ENST00000513621 740 ntBASIC0.04□□□□□ -2.4
UBE2D4Q9Y2X8 RNA5SP255-201ENST00000516370 107 ntBASIC0.04□□□□□ -2.4
UBE2D4Q9Y2X8 AC092451.2-201ENST00000538746 658 ntBASIC0.04□□□□□ -2.4
UBE2D4Q9Y2X8 AC022387.2-201ENST00000604050 448 ntBASIC0.04□□□□□ -2.4
UBE2D4Q9Y2X8 AC130324.3-201ENST00000614165 542 ntBASIC0.04□□□□□ -2.4
UBE2D4Q9Y2X8 AC008133.2-201ENST00000624540 351 ntBASIC0.04□□□□□ -2.4
UBE2D4Q9Y2X8 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
UBE2D4Q9Y2X8 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 AC090625.1-201ENST00000357130 210 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 MIR330-201ENST00000362196 94 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 RNU6-492P-201ENST00000363035 104 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 MIR942-201ENST00000401111 86 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 CCNG1P1-201ENST00000406783 885 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 RPL21P111-201ENST00000418453 477 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 RPS3AP37-201ENST00000419176 745 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 AL358176.2-201ENST00000425769 204 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 AC093422.3-201ENST00000428506 305 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 RPL31P54-201ENST00000429803 370 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 AC002381.1-201ENST00000447049 280 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 GTF2IP12-201ENST00000456547 356 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 SNORA68.3-201ENST00000515906 83 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 RNU6-581P-201ENST00000516214 105 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 RNA5SP290-201ENST00000517133 127 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 MTCO2P15-201ENST00000532655 656 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 AC027104.1-201ENST00000563702 681 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 AC005730.3-201ENST00000583067 366 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 AP001429.1-201ENST00000602568 530 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 AC079610.2-201ENST00000604818 690 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 AP005212.4-201ENST00000614206 710 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 AC080188.3-201ENST00000624842 748 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 MIR4275-201ENST00000636486 87 ntBASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
UBE2D4Q9Y2X8 AC073544.1-201ENST00000600110 1595 ntBASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 RNU6-222P-201ENST00000362438 107 ntBASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 MIR421-201ENST00000365696 85 ntBASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 MIR548B-201ENST00000385247 97 ntBASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 SNORD12-201ENST00000391002 90 ntBASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 MTCO2P25-201ENST00000447065 681 ntBASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 AC114982.2-201ENST00000461396 358 ntBASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 AC092989.1-201ENST00000481235 277 ntBASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 AC108740.1-201ENST00000498629 225 ntBASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 AC005951.2-201ENST00000576282 495 ntBASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 RAC1P9-201ENST00000604990 392 ntBASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 AC130454.1-201ENST00000622948 401 ntBASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 AL159972.1-201ENST00000625150 448 ntBASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 MTCO1P18-201ENST00000455518 1419 ntBASIC0.02□□□□□ -2.41
UBE2D4Q9Y2X8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms