Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 RNU6-1301P-201ENST00000362724 104 ntBASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 RNU6-270P-201ENST00000364131 105 ntBASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 Y_RNA.416-201ENST00000384014 113 ntBASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 Y_RNA.477-201ENST00000384352 108 ntBASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 MIR215-201ENST00000384858 110 ntBASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 SNORD58.1-201ENST00000391313 66 ntBASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 AC074117.2-201ENST00000417130 397 ntBASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 AC096920.1-201ENST00000423991 241 ntBASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 AC091286.1-201ENST00000431233 461 ntBASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 AC004383.1-201ENST00000438135 289 ntBASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 AC125238.1-201ENST00000448842 249 ntBASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 RPL21P104-201ENST00000464143 478 ntBASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 SNORA31.6-201ENST00000516241 130 ntBASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 Y_RNA.673-201ENST00000516306 88 ntBASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 MIR4300-201ENST00000581016 96 ntBASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 AC024581.2-201ENST00000619986 252 ntBASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.47□□□□□ -1.85
CDC42EP3Q9UKI2 AL672296.1-201ENST00000427780 2158 ntBASIC3.46□□□□□ -1.85
CDC42EP3Q9UKI2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 RNA5SP307-201ENST00000362863 116 ntBASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 RNU5B-2P-201ENST00000363036 113 ntBASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 SNORD116-20-201ENST00000384529 92 ntBASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 MIR491-201ENST00000384877 84 ntBASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 MIR548H3-201ENST00000408771 118 ntBASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 AL353705.4-201ENST00000449661 238 ntBASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 TOMM22P6-201ENST00000465035 409 ntBASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 AF186996.7-201ENST00000492781 209 ntBASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 AC091874.1-201ENST00000511402 339 ntBASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 RNU6-111P-201ENST00000517179 105 ntBASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 SNORA70.24-201ENST00000517233 118 ntBASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 AC093023.1-201ENST00000547375 507 ntBASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 NACAP3-201ENST00000552100 481 ntBASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 AC020895.1-201ENST00000595362 272 ntBASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 AL451007.1-201ENST00000595491 289 ntBASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 AC240442.1-201ENST00000616055 283 ntBASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 SNORA43.4-201ENST00000629559 138 ntBASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 AL353743.1-202ENST00000431724 1695 ntBASIC3.46□□□□□ -1.86
CDC42EP3Q9UKI2 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 AP001486.2-201ENST00000561652 5113 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 MIR423-201ENST00000362201 94 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 SNORD81.1-201ENST00000363064 77 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 RNA5SP322-201ENST00000363617 119 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 Y_RNA.515-201ENST00000384535 112 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 RNU1-89P-201ENST00000384592 164 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 RNU1-139P-201ENST00000391307 165 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 FTH1P15-201ENST00000406984 280 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 SNORA74C-2-201ENST00000411179 201 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 AL590135.1-201ENST00000422215 156 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 EIF1P2-201ENST00000428233 350 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 HMGN2P10-201ENST00000448085 265 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 RNA5SP246-201ENST00000458909 119 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 RPL35AP15-201ENST00000468042 339 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 AC084357.1-201ENST00000473404 255 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 RPS26P21-201ENST00000475397 348 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 HIGD1AP1-201ENST00000550979 275 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 AC120057.2-201ENST00000571520 271 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 AC007179.3-201ENST00000604976 235 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 Y_RNA.772-201ENST00000606692 102 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 AL391261.4-201ENST00000616012 481 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 MIR376A1-201ENST00000616574 68 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 MIR6500-201ENST00000622700 86 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 AC012442.3-202ENST00000636742 206 ntBASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms