Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RNU7-30P-201ENST00000516835 62 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
SIX2Q9NPC8 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.6□□□□□ -1.99
SIX2Q9NPC8 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.6□□□□□ -1.99
SIX2Q9NPC8 AC027176.1-201ENST00000560204 514 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.6□□□□□ -1.99
SIX2Q9NPC8 MIR3942-201ENST00000585264 109 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 MIR5692C1-201ENST00000585309 91 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 AC091135.1-201ENST00000585943 307 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 AL355598.1-201ENST00000604169 202 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 AC004832.5-201ENST00000608677 401 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SIX2Q9NPC8 FAM157A-202ENST00000615155 405 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 U4.3-201ENST00000621047 82 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 AC073308.1-201ENST00000623696 305 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.6□□□□□ -1.99
SIX2Q9NPC8 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SIX2Q9NPC8 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SIX2Q9NPC8 MAPK10-322ENST00000641485 4530 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SIX2Q9NPC8 FAM35CP-201ENST00000554755 2470 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 AC009487.2-201ENST00000420969 6821 ntBASIC2.59□□□□□ -1.99
SIX2Q9NPC8 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
SIX2Q9NPC8 RNU6-1252P-201ENST00000363054 104 ntBASIC2.59□□□□□ -1.99
SIX2Q9NPC8 Y_RNA.142-201ENST00000363491 102 ntBASIC2.59□□□□□ -1.99
SIX2Q9NPC8 RNU1-51P-201ENST00000365345 176 ntBASIC2.59□□□□□ -1.99
SIX2Q9NPC8 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SIX2Q9NPC8 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.59□□□□□ -1.99
SIX2Q9NPC8 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.59□□□□□ -1.99
SIX2Q9NPC8 AL353729.1-201ENST00000425044 720 ntBASIC2.59□□□□□ -1.99
SIX2Q9NPC8 AL627311.1-201ENST00000431514 115 ntBASIC2.59□□□□□ -1.99
SIX2Q9NPC8 AC010099.1-201ENST00000455434 375 ntBASIC2.59□□□□□ -1.99
SIX2Q9NPC8 RPL7P43-201ENST00000478876 753 ntBASIC2.59□□□□□ -1.99
SIX2Q9NPC8 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.59□□□□□ -1.99
SIX2Q9NPC8 AC079140.5-201ENST00000507882 310 ntBASIC2.59□□□□□ -1.99
SIX2Q9NPC8 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.59□□□□□ -1.99
SIX2Q9NPC8 AP000889.2-201ENST00000532684 490 ntBASIC2.59□□□□□ -1.99
SIX2Q9NPC8 AL391261.3-201ENST00000557194 520 ntBASIC2.59□□□□□ -1.99
SIX2Q9NPC8 AC026464.5-201ENST00000562497 722 ntBASIC2.59□□□□□ -1.99
SIX2Q9NPC8 AC005498.1-201ENST00000592125 465 ntBASIC2.59□□□□□ -1.99
SIX2Q9NPC8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -2
SIX2Q9NPC8 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SIX2Q9NPC8 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.58□□□□□ -2
SIX2Q9NPC8 Y_RNA.324-201ENST00000365165 102 ntBASIC2.58□□□□□ -2
SIX2Q9NPC8 Z98749.2-208ENST00000381646 500 ntBASIC2.58□□□□□ -2
SIX2Q9NPC8 RNU6-658P-201ENST00000384606 106 ntBASIC2.58□□□□□ -2
SIX2Q9NPC8 MIR196B-201ENST00000384852 84 ntBASIC2.58□□□□□ -2
SIX2Q9NPC8 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.58□□□□□ -2
SIX2Q9NPC8 AL356432.1-201ENST00000405809 419 ntBASIC2.58□□□□□ -2
SIX2Q9NPC8 RNU6-1077P-201ENST00000410506 102 ntBASIC2.58□□□□□ -2
SIX2Q9NPC8 AL365400.1-201ENST00000431854 640 ntBASIC2.58□□□□□ -2
SIX2Q9NPC8 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.58□□□□□ -2
SIX2Q9NPC8 MTND1P11-201ENST00000456661 876 ntBASIC2.58□□□□□ -2
SIX2Q9NPC8 snoU13.28-201ENST00000459235 104 ntBASIC2.58□□□□□ -2
SIX2Q9NPC8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.58□□□□□ -2
SIX2Q9NPC8 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.58□□□□□ -2
SIX2Q9NPC8 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.58□□□□□ -2
SIX2Q9NPC8 RPS27AP10-201ENST00000496103 208 ntBASIC2.58□□□□□ -2
SIX2Q9NPC8 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.58□□□□□ -2
SIX2Q9NPC8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.58□□□□□ -2
SIX2Q9NPC8 RNU6-1183P-201ENST00000517054 60 ntBASIC2.58□□□□□ -2
SIX2Q9NPC8 AC109329.2-201ENST00000519658 482 ntBASIC2.58□□□□□ -2
SIX2Q9NPC8 AP000867.2-201ENST00000532468 320 ntBASIC2.58□□□□□ -2
SIX2Q9NPC8 AC103810.6-201ENST00000606708 136 ntBASIC2.58□□□□□ -2
SIX2Q9NPC8 AL022345.1-201ENST00000607292 135 ntBASIC2.58□□□□□ -2
SIX2Q9NPC8 uc_338.5-201ENST00000611839 155 ntBASIC2.58□□□□□ -2
SIX2Q9NPC8 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.58□□□□□ -2
SIX2Q9NPC8 MIR1291-201ENST00000627649 87 ntBASIC2.58□□□□□ -2
SIX2Q9NPC8 U6.99-201ENST00000637524 83 ntBASIC2.58□□□□□ -2
SIX2Q9NPC8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SIX2Q9NPC8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.58□□□□□ -2
SIX2Q9NPC8 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.57□□□□□ -2
SIX2Q9NPC8 Y_RNA.184-201ENST00000363884 108 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 Y_RNA.263-201ENST00000364659 114 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 Y_RNA.301-201ENST00000364990 103 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.57□□□□□ -2
SIX2Q9NPC8 MIR10A-201ENST00000385043 110 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 SAR1AP2-201ENST00000392696 594 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 MIR450B-201ENST00000401182 78 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 NDUFS5P4-201ENST00000412983 318 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.57□□□□□ -2
SIX2Q9NPC8 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.57□□□□□ -2
SIX2Q9NPC8 PPP1R2P5-201ENST00000457256 603 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 RPS29P20-201ENST00000489592 171 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 AC026801.1-201ENST00000497178 464 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 AC103851.1-201ENST00000506833 274 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.57□□□□□ -2
SIX2Q9NPC8 AC026436.1-201ENST00000510537 270 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 RNU6-256P-201ENST00000516747 97 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 AC069113.1-201ENST00000517763 267 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 RNU6-323P-201ENST00000521915 107 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.57□□□□□ -2
SIX2Q9NPC8 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.57□□□□□ -2
SIX2Q9NPC8 MIR4782-201ENST00000577987 79 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 MIR4474-201ENST00000579189 78 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 FGF7P1-201ENST00000582820 288 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.57□□□□□ -2
SIX2Q9NPC8 AC011471.1-201ENST00000585766 187 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 APOOP1-201ENST00000604695 592 ntBASIC2.57□□□□□ -2
SIX2Q9NPC8 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms