Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 U2.14-201ENST00000615943 113 ntBASIC3.49□□□□□ -1.85
SEC61A2Q9H9S3 AC241585.2-209ENST00000638217 143 ntBASIC3.49□□□□□ -1.85
SEC61A2Q9H9S3 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.49□□□□□ -1.85
SEC61A2Q9H9S3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SEC61A2Q9H9S3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SEC61A2Q9H9S3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SEC61A2Q9H9S3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SEC61A2Q9H9S3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 RNU6-545P-201ENST00000362681 104 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 Y_RNA.76-201ENST00000362931 109 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 RNU6-105P-201ENST00000363909 104 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 RN7SKP280-201ENST00000364196 304 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 RNU6-968P-201ENST00000384076 107 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 RNU6-1181P-201ENST00000384191 106 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 MIR32-201ENST00000384965 70 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 SNORA57.1-201ENST00000391227 145 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 UBA52P6-201ENST00000399822 382 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 MIR1290-201ENST00000408735 78 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 RNA5SP44-201ENST00000410446 133 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 AC017079.2-201ENST00000416102 485 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 RPS29P7-201ENST00000439662 171 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 HSPE1P25-201ENST00000455484 251 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 AL136097.1-201ENST00000456945 913 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 RPL7P49-201ENST00000471402 708 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 RPL23AP75-201ENST00000491601 451 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 UBE2CP3-201ENST00000502715 450 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 AC026784.1-201ENST00000507986 352 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 SNORA31.8-201ENST00000516327 108 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 RNU6-255P-201ENST00000516957 105 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 AC087441.2-201ENST00000529141 262 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 TRAV28-201ENST00000557548 323 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 MIR4782-201ENST00000577987 79 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 AC010620.2-201ENST00000600135 313 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 AC244205.2-202ENST00000635781 342 ntBASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.48□□□□□ -1.85
SEC61A2Q9H9S3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 U3.15-201ENST00000365398 212 ntBASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 RNU6-746P-201ENST00000384112 109 ntBASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 RNU6-843P-201ENST00000384454 104 ntBASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 AL590383.1-201ENST00000428602 75 ntBASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 AL445305.1-201ENST00000432577 575 ntBASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 SNRPEP9-201ENST00000436794 238 ntBASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 AL392103.1-201ENST00000447000 198 ntBASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 RN7SL93P-201ENST00000463035 293 ntBASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 RPL30P1-201ENST00000488676 339 ntBASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 BTF3L4P4-201ENST00000506381 449 ntBASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 AC106785.1-201ENST00000565935 262 ntBASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 AC136601.2-201ENST00000604356 474 ntBASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 UBE3AP2-201ENST00000429033 2259 ntBASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SEC61A2Q9H9S3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.46□□□□□ -1.85
SEC61A2Q9H9S3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
SEC61A2Q9H9S3 AC007785.2-201ENST00000598627 1916 ntBASIC3.46□□□□□ -1.85
SEC61A2Q9H9S3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 AL079305.1-201ENST00000623159 3008 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 Y_RNA.286-201ENST00000364813 102 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 RNA5SP97-201ENST00000365006 84 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-290P-201ENST00000365212 101 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-318P-201ENST00000384283 103 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 RNU4-30P-201ENST00000410245 143 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 RNA5SP31-201ENST00000411144 127 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 AC124916.1-201ENST00000444020 547 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 AC009237.8-201ENST00000445492 379 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 AC016700.2-201ENST00000446011 156 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 NDUFB4P10-201ENST00000452541 359 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 AC091874.1-201ENST00000511402 339 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 SNORA43.2-201ENST00000516652 128 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-1073P-201ENST00000517182 106 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 AP002392.1-201ENST00000537692 208 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms