Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS16Q9H269 AC007318.2-201ENST00000620999 243 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 U2.21-201ENST00000637295 81 ntBASIC3.34□□□□□ -1.87
VPS16Q9H269 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VPS16Q9H269 AC008264.2-201ENST00000610193 3731 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 FAM35CP-201ENST00000554755 2470 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.33□□□□□ -1.88
VPS16Q9H269 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS16Q9H269 RNU1-73P-201ENST00000383971 164 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 Y_RNA.404-201ENST00000383978 102 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 RNU6-1032P-201ENST00000384100 107 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 SNORA7.4-201ENST00000384249 137 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 RNU6-1179P-201ENST00000384667 107 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 RNU6-331P-201ENST00000384724 107 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 MIR578-201ENST00000384828 96 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 SAR1AP2-201ENST00000392696 594 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 NDUFS5P4-201ENST00000412983 318 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 RPL7P10-201ENST00000417407 739 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.33□□□□□ -1.88
VPS16Q9H269 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS16Q9H269 AC098614.2-201ENST00000426040 255 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 HMGB1P9-201ENST00000429856 646 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 SNAP23P1-201ENST00000433229 246 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 AC244505.4-201ENST00000434905 287 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS16Q9H269 SSXP5-201ENST00000443473 287 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 AL360271.2-201ENST00000447710 161 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS16Q9H269 RPL26P9-201ENST00000457466 433 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 MTATP8P1-201ENST00000467115 207 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.33□□□□□ -1.88
VPS16Q9H269 AC097473.1-201ENST00000508142 408 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS16Q9H269 AC026782.1-201ENST00000512952 449 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 RNA5SP385-201ENST00000515947 110 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS16Q9H269 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS16Q9H269 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS16Q9H269 AC083806.3-201ENST00000614016 455 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 MIR6128-201ENST00000615528 109 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 AC087588.2-201ENST00000617667 426 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 AC010378.1-201ENST00000619270 362 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 AC012314.7-201ENST00000619693 93 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 AC092608.2-201ENST00000624427 218 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 AL353743.1-202ENST00000431724 1695 ntBASIC3.33□□□□□ -1.88
VPS16Q9H269 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.33□□□□□ -1.88
VPS16Q9H269 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS16Q9H269 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS16Q9H269 AC010680.1-201ENST00000590024 3590 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 RNU6-778P-201ENST00000363269 103 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 Y_RNA.158-201ENST00000363651 101 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 RNU6-593P-201ENST00000364716 112 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 SNORA75B-201ENST00000384053 137 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 RNU6-198P-201ENST00000384258 104 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 Y_RNA.463-201ENST00000384271 102 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 SNORA40C-201ENST00000391285 128 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
VPS16Q9H269 MRPL42P3-201ENST00000401492 326 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS16Q9H269 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS16Q9H269 MTCYBP9-201ENST00000431021 303 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 MYL8P-204ENST00000431574 518 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 NDUFB1P2-201ENST00000449477 176 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS16Q9H269 AP004217.1-201ENST00000480579 346 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 AC116337.1-201ENST00000509680 687 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS16Q9H269 Y_RNA.670-201ENST00000516255 105 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 RNU6-1332P-201ENST00000516666 104 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 RNU6-572P-201ENST00000516724 80 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 RN7SKP282-201ENST00000516824 299 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 SNORA31.19-201ENST00000517079 126 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS16Q9H269 AC073539.2-201ENST00000597113 165 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS16Q9H269 VN1R107P-201ENST00000601784 209 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 AC006006.1-201ENST00000603082 144 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 AC012119.1-201ENST00000603184 222 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 AC012468.1-201ENST00000604888 430 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 AC005014.2-201ENST00000607795 599 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 AC009229.3-201ENST00000608056 282 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 MIR6075-201ENST00000620782 95 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 AC022418.1-201ENST00000624118 445 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS16Q9H269 U6.99-201ENST00000637524 83 ntBASIC3.32□□□□□ -1.88
VPS16Q9H269 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS16Q9H269 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS16Q9H269 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS16Q9H269 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS16Q9H269 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS16Q9H269 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS16Q9H269 AC073325.2-201ENST00000339545 159 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 SNORD3E-201ENST00000362899 217 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS16Q9H269 Y_RNA.496-201ENST00000384444 101 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 MIR7-3-201ENST00000384898 110 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 RNU6-907P-201ENST00000390924 102 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms