Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 CYCSP23-201ENST00000519781 313 ntBASIC4.15□□□□□ -1.75
BHLHE41Q9C0J9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
BHLHE41Q9C0J9 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.15□□□□□ -1.75
BHLHE41Q9C0J9 AC011602.1-201ENST00000546484 331 ntBASIC4.15□□□□□ -1.75
BHLHE41Q9C0J9 CYP4A43P-201ENST00000568156 121 ntBASIC4.15□□□□□ -1.75
BHLHE41Q9C0J9 AC022441.3-201ENST00000605737 136 ntBASIC4.15□□□□□ -1.75
BHLHE41Q9C0J9 AC048347.1-201ENST00000624621 427 ntBASIC4.15□□□□□ -1.75
BHLHE41Q9C0J9 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
BHLHE41Q9C0J9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
BHLHE41Q9C0J9 MTND5P35-201ENST00000557537 1720 ntBASIC4.15□□□□□ -1.75
BHLHE41Q9C0J9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
BHLHE41Q9C0J9 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.15□□□□□ -1.75
BHLHE41Q9C0J9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
BHLHE41Q9C0J9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 RNA5SP28-201ENST00000363841 119 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 Y_RNA.179-201ENST00000363844 90 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 Y_RNA.262-201ENST00000364641 102 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 SNORD113-1-201ENST00000365321 69 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 RNU6-213P-201ENST00000384051 104 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 HLA-N-201ENST00000437516 135 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 AC009237.7-201ENST00000447357 229 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 HMGN2P10-201ENST00000448085 265 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 AP000705.1-201ENST00000454567 350 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 AP000873.1-201ENST00000463987 400 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 RN7SKP289-201ENST00000517244 295 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 MRPS18CP4-201ENST00000535821 231 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 AC233702.2-202ENST00000562547 291 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 MIR3144-201ENST00000579460 79 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 AC079587.1-201ENST00000603846 277 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 AP005019.3-201ENST00000620418 560 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 AC073308.1-201ENST00000623696 305 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 AL109809.4-201ENST00000603520 2185 ntBASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
BHLHE41Q9C0J9 MFSD8-216ENST00000641147 4009 ntBASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 AC126755.2-208ENST00000327792 462 ntBASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 AC138969.1-213ENST00000331436 462 ntBASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 SNORA31-201ENST00000362607 130 ntBASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 RNA5SP197-201ENST00000363357 119 ntBASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 RNU6-1285P-201ENST00000363480 105 ntBASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 RNU6-704P-201ENST00000364162 103 ntBASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 RNA5SP505-201ENST00000364748 108 ntBASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 Y_RNA.498-201ENST00000384460 102 ntBASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 RPS26P42-201ENST00000413485 326 ntBASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 AC019205.3-201ENST00000424573 156 ntBASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 NDUFS5P3-201ENST00000450668 321 ntBASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 MTND5P41-201ENST00000517498 206 ntBASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 AP004242.1-201ENST00000533701 349 ntBASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 AC069240.1-201ENST00000548774 375 ntBASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 MIR4284-201ENST00000578924 81 ntBASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 AP001485.1-201ENST00000604799 199 ntBASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
BHLHE41Q9C0J9 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 AC092593.1-201ENST00000515413 1815 ntBASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 AC007496.3-201ENST00000624987 3443 ntBASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 Y_RNA.435-201ENST00000384095 112 ntBASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 RNA5SP390-201ENST00000410191 113 ntBASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 HSPE1P12-201ENST00000412576 301 ntBASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 RPL23AP26-201ENST00000412728 464 ntBASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 YPEL5P1-201ENST00000419731 367 ntBASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 RPS23P7-201ENST00000466210 444 ntBASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 AC074133.1-201ENST00000515696 183 ntBASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 RNU6-1219P-201ENST00000516143 112 ntBASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 IFITM8P-201ENST00000522529 394 ntBASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 AC018448.1-201ENST00000552843 316 ntBASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 AC021739.1-201ENST00000559631 174 ntBASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 AC090897.2-201ENST00000581715 130 ntBASIC4.12□□□□□ -1.75
BHLHE41Q9C0J9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms