Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 RPL26P27-201ENST00000414397 437 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 NUP35P1-201ENST00000422734 947 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 AL358176.2-201ENST00000425769 204 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 RPL23AP22-201ENST00000437556 453 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 HIGD1AP2-201ENST00000446367 280 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 RNA5SP310-201ENST00000459084 116 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 AC021146.2-201ENST00000504736 556 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 AP005902.1-201ENST00000521358 186 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 AC005476.1-201ENST00000554427 397 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 H3F3AP1-201ENST00000559984 334 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 AC005046.1-201ENST00000608515 625 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 AL162373.1-201ENST00000620433 407 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.26□□□□□ -1.89
AMBRA1Q9C0C7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 RNY1P16-201ENST00000363063 111 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 Y_RNA.133-201ENST00000363428 110 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 RNU6-99P-201ENST00000364721 107 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 RNU6-1105P-201ENST00000384774 107 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 Y_RNA.577-201ENST00000384794 101 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 MIR218-2-201ENST00000385006 110 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 RNU6-1156P-201ENST00000410365 100 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 RNU2-23P-201ENST00000410545 195 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 AC017079.2-201ENST00000416102 485 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 AC098831.1-201ENST00000440661 216 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 AC125238.1-201ENST00000448842 249 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 BTF3P15-201ENST00000455606 336 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 HMGN1P18-201ENST00000457642 277 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 RPL7P47-201ENST00000497299 556 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 AC116655.1-201ENST00000508324 901 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 RN7SKP18-201ENST00000516005 275 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 RNU6-764P-201ENST00000516396 105 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 RNU6-928P-201ENST00000516876 104 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 RNU6-612P-201ENST00000516909 102 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 AC010186.2-204ENST00000537668 439 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 GNAI2P1-201ENST00000541815 315 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 AC024153.1-201ENST00000603103 365 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 AC005000.2-201ENST00000605468 310 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 AC005014.2-201ENST00000607795 599 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 AC119674.1-207ENST00000641355 633 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 SRP72P2-201ENST00000344851 1979 ntBASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.25□□□□□ -1.89
AMBRA1Q9C0C7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 RNU6-78P-201ENST00000362897 107 ntBASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 RNU6-898P-201ENST00000365627 104 ntBASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 MIR183-201ENST00000384958 110 ntBASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 MIR518D-201ENST00000385014 87 ntBASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 RPS29P13-201ENST00000402041 169 ntBASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 AL591034.1-201ENST00000407447 340 ntBASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 AC126124.2-201ENST00000413542 321 ntBASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 EIF4EP2-201ENST00000422816 654 ntBASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 MRPS18CP6-201ENST00000423587 223 ntBASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 RPL37P4-201ENST00000448908 268 ntBASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 RPS27P29-201ENST00000463110 252 ntBASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 SNORA70.19-201ENST00000516717 90 ntBASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 AMZ2P1-203ENST00000565833 850 ntBASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 MIR5696-201ENST00000578474 85 ntBASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 AC104695.3-201ENST00000604052 296 ntBASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 AP003355.3-201ENST00000623465 114 ntBASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 U6.105-201ENST00000637379 88 ntBASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 OTUD4P1-201ENST00000237841 3067 ntBASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
AMBRA1Q9C0C7 AC007496.3-201ENST00000624987 3443 ntBASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
AMBRA1Q9C0C7 AC005592.1-201ENST00000566527 1640 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms