Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 AF228730.4-201ENST00000421457 183 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 AC091286.1-201ENST00000431233 461 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 HMGN2P31-201ENST00000432430 273 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 CST9LP2-201ENST00000437612 320 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 RNU7-152P-201ENST00000458982 64 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 RPL7P42-201ENST00000481005 679 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 PTP4A1P4-201ENST00000512479 322 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 SNORA67.7-201ENST00000516664 135 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 SNORA31.18-201ENST00000517043 134 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 RNU6-1213P-201ENST00000517075 94 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 MIR3158-1-201ENST00000583596 81 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 AC008739.3-201ENST00000603262 127 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 AL355877.2-201ENST00000603670 358 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 AC024581.2-201ENST00000619986 252 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 AC090971.5-201ENST00000621102 293 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 AC097372.5-201ENST00000623665 376 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 AC090617.7-201ENST00000623952 126 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 MTND5P10-201ENST00000603719 1809 ntBASIC3.26□□□□□ -1.89
TRIM54Q9BYV2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 SNORD56.1-201ENST00000362913 68 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 RNU6-525P-201ENST00000363685 104 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 Y_RNA.187-201ENST00000363918 113 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 RNU6-43P-201ENST00000384302 107 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 RNU6-750P-201ENST00000390946 107 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 Y_RNA.646-201ENST00000410980 101 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 AC074117.2-201ENST00000417130 397 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 USMG5P1-201ENST00000425964 177 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 MTCO2P12-201ENST00000427426 682 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 MTND3P9-201ENST00000429526 346 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 FTH1P25-201ENST00000447665 469 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 AL358232.1-201ENST00000448030 501 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 CYCSP35-201ENST00000451978 304 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 ELOCP24-201ENST00000456370 334 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 AC097473.1-201ENST00000508142 408 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 MIR4273-201ENST00000582824 84 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 AC005899.2-201ENST00000584353 90 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 MIR4276-201ENST00000584832 70 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 AC019159.1-201ENST00000605094 187 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 MIR8076-201ENST00000611401 83 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 Z83843.1-201ENST00000604070 3685 ntBASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
TRIM54Q9BYV2 HAUS6P2-201ENST00000433254 2404 ntBASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 AC008669.1-201ENST00000565823 2178 ntBASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 RNU6-227P-201ENST00000362865 103 ntBASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 RNU6-1059P-201ENST00000363752 98 ntBASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 RNA5SP139-201ENST00000364340 117 ntBASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 RNU6-748P-201ENST00000384648 107 ntBASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 MIR1302-11-201ENST00000408051 138 ntBASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 MIR1302-9-201ENST00000408365 138 ntBASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 MIR1302-10-201ENST00000408734 138 ntBASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 AL365496.1-201ENST00000426885 215 ntBASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 RPL23AP50-201ENST00000434149 455 ntBASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 AC007677.1-201ENST00000445757 515 ntBASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 RPL21P10-201ENST00000463521 490 ntBASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 AC006483.1-201ENST00000487308 313 ntBASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 AC093249.1-201ENST00000567049 203 ntBASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 CYP2C61P-201ENST00000604072 290 ntBASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 MIR1302-2-201ENST00000607096 138 ntBASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 AL356274.2-201ENST00000624379 3752 ntBASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
TRIM54Q9BYV2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 RNU6-799P-201ENST00000363567 107 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 RNU6-596P-201ENST00000365395 98 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 U8.8-201ENST00000365399 135 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms