Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.38□□□□□ -2.35
ABCA3Q99758 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.38□□□□□ -2.35
ABCA3Q99758 AC004805.2-201ENST00000605382 482 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 AL109620.1-201ENST00000618738 1197 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 MTCO1P18-201ENST00000455518 1419 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 AL159152.1-201ENST00000635019 2587 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 ENSAP3-201ENST00000312710 333 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 MIR525-201ENST00000384978 85 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
ABCA3Q99758 AC007435.1-201ENST00000421086 415 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 PSMA6P3-201ENST00000428242 164 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.38□□□□□ -2.35
ABCA3Q99758 RNA5SP269-201ENST00000459032 137 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 RNU4-77P-201ENST00000516692 156 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 RNU6-889P-201ENST00000517189 103 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.38□□□□□ -2.35
ABCA3Q99758 AP001429.1-201ENST00000602568 530 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 AL671309.1-201ENST00000603750 544 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 AC013476.2-201ENST00000614456 459 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 AC134026.1-201ENST00000623249 2239 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 AC017037.3-201ENST00000625016 472 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 MTND4P16-201ENST00000466108 1367 ntBASIC0.37□□□□□ -2.35
ABCA3Q99758 RNU6-543P-201ENST00000362576 108 ntBASIC0.37□□□□□ -2.35
ABCA3Q99758 RPL26P26-201ENST00000480251 434 ntBASIC0.37□□□□□ -2.35
ABCA3Q99758 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.37□□□□□ -2.35
ABCA3Q99758 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.37□□□□□ -2.35
ABCA3Q99758 VN1R88P-201ENST00000596787 292 ntBASIC0.37□□□□□ -2.35
ABCA3Q99758 AC245060.5-201ENST00000610778 3293 ntBASIC0.36□□□□□ -2.35
ABCA3Q99758 SEC63P2-201ENST00000503863 1939 ntBASIC0.36□□□□□ -2.35
ABCA3Q99758 Y_RNA.170-201ENST00000363746 110 ntBASIC0.36□□□□□ -2.35
ABCA3Q99758 RNU2-33P-201ENST00000410344 192 ntBASIC0.36□□□□□ -2.35
ABCA3Q99758 AC010631.1-201ENST00000474150 156 ntBASIC0.36□□□□□ -2.35
ABCA3Q99758 RNA5SP290-201ENST00000517133 127 ntBASIC0.36□□□□□ -2.35
ABCA3Q99758 AC018659.1-201ENST00000551083 169 ntBASIC0.36□□□□□ -2.35
ABCA3Q99758 RNU6-546P-201ENST00000383991 107 ntBASIC0.35□□□□□ -2.35
ABCA3Q99758 RNU6-611P-201ENST00000384276 104 ntBASIC0.35□□□□□ -2.35
ABCA3Q99758 RPS3AP37-201ENST00000419176 745 ntBASIC0.35□□□□□ -2.35
ABCA3Q99758 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
ABCA3Q99758 MTND5P14-201ENST00000441481 1267 ntBASIC0.35□□□□□ -2.35
ABCA3Q99758 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.35□□□□□ -2.35
ABCA3Q99758 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
ABCA3Q99758 AC084024.2-201ENST00000503480 791 ntBASIC0.35□□□□□ -2.35
ABCA3Q99758 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.35□□□□□ -2.35
ABCA3Q99758 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.35□□□□□ -2.35
ABCA3Q99758 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.35□□□□□ -2.35
ABCA3Q99758 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.35□□□□□ -2.35
ABCA3Q99758 BNIP3P27-201ENST00000599991 412 ntBASIC0.35□□□□□ -2.35
ABCA3Q99758 AC068790.6-201ENST00000602558 258 ntBASIC0.35□□□□□ -2.35
ABCA3Q99758 AL583856.2-201ENST00000606298 543 ntBASIC0.35□□□□□ -2.35
ABCA3Q99758 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.35□□□□□ -2.35
ABCA3Q99758 PPP1R11P2-201ENST00000423543 382 ntBASIC0.35□□□□□ -2.35
ABCA3Q99758 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.35□□□□□ -2.35
ABCA3Q99758 AC005345.1-201ENST00000431868 217 ntBASIC0.35□□□□□ -2.35
ABCA3Q99758 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.35□□□□□ -2.35
ABCA3Q99758 UBE2V1P8-201ENST00000437166 265 ntBASIC0.35□□□□□ -2.35
ABCA3Q99758 MTCO3P17-201ENST00000443775 513 ntBASIC0.35□□□□□ -2.35
ABCA3Q99758 COX6CP6-201ENST00000490840 228 ntBASIC0.35□□□□□ -2.35
ABCA3Q99758 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.35□□□□□ -2.35
ABCA3Q99758 RNU4-54P-201ENST00000516428 129 ntBASIC0.35□□□□□ -2.35
ABCA3Q99758 RNU6-678P-201ENST00000516832 109 ntBASIC0.35□□□□□ -2.35
ABCA3Q99758 RNU6-667P-201ENST00000517186 102 ntBASIC0.35□□□□□ -2.35
ABCA3Q99758 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.35□□□□□ -2.35
ABCA3Q99758 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.35□□□□□ -2.35
ABCA3Q99758 AL132822.1-201ENST00000617063 513 ntBASIC0.35□□□□□ -2.35
ABCA3Q99758 SNORD114-24-201ENST00000365029 72 ntBASIC0.34□□□□□ -2.36
ABCA3Q99758 RNU6-1280P-201ENST00000365211 107 ntBASIC0.34□□□□□ -2.36
ABCA3Q99758 AL031577.2-201ENST00000404133 280 ntBASIC0.34□□□□□ -2.36
ABCA3Q99758 AL356776.1-201ENST00000406574 447 ntBASIC0.34□□□□□ -2.36
ABCA3Q99758 AC114482.1-201ENST00000418010 247 ntBASIC0.34□□□□□ -2.36
ABCA3Q99758 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.34□□□□□ -2.36
ABCA3Q99758 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.34□□□□□ -2.36
ABCA3Q99758 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.34□□□□□ -2.36
ABCA3Q99758 AC090142.3-201ENST00000519012 385 ntBASIC0.34□□□□□ -2.36
ABCA3Q99758 ARL2BPP5-201ENST00000523141 481 ntBASIC0.34□□□□□ -2.36
ABCA3Q99758 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.34□□□□□ -2.36
ABCA3Q99758 NDUFA8P1-201ENST00000605525 367 ntBASIC0.34□□□□□ -2.36
ABCA3Q99758 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.34□□□□□ -2.36
ABCA3Q99758 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.34□□□□□ -2.36
ABCA3Q99758 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.34□□□□□ -2.36
ABCA3Q99758 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.33□□□□□ -2.36
ABCA3Q99758 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.33□□□□□ -2.36
ABCA3Q99758 RNU6-110P-201ENST00000384508 104 ntBASIC0.33□□□□□ -2.36
ABCA3Q99758 MIR597-201ENST00000384968 97 ntBASIC0.33□□□□□ -2.36
ABCA3Q99758 SKA2P1-201ENST00000425592 390 ntBASIC0.33□□□□□ -2.36
ABCA3Q99758 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.33□□□□□ -2.36
ABCA3Q99758 PTGES3P1-201ENST00000439531 483 ntBASIC0.33□□□□□ -2.36
ABCA3Q99758 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.33□□□□□ -2.36
ABCA3Q99758 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.33□□□□□ -2.36
ABCA3Q99758 RNU6-581P-201ENST00000516214 105 ntBASIC0.33□□□□□ -2.36
ABCA3Q99758 RNU6-586P-201ENST00000517265 104 ntBASIC0.33□□□□□ -2.36
ABCA3Q99758 AC022616.8-201ENST00000533569 253 ntBASIC0.33□□□□□ -2.36
ABCA3Q99758 MIR4305-201ENST00000583252 102 ntBASIC0.33□□□□□ -2.36
ABCA3Q99758 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.33□□□□□ -2.36
ABCA3Q99758 AC006001.4-201ENST00000622243 395 ntBASIC0.33□□□□□ -2.36
ABCA3Q99758 RNU6-673P-201ENST00000365084 104 ntBASIC0.33□□□□□ -2.36
ABCA3Q99758 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.33□□□□□ -2.36
ABCA3Q99758 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.33□□□□□ -2.36
ABCA3Q99758 ELOCP14-201ENST00000428070 331 ntBASIC0.33□□□□□ -2.36
ABCA3Q99758 ELOCP7-201ENST00000439968 331 ntBASIC0.33□□□□□ -2.36
ABCA3Q99758 AL358794.1-201ENST00000445689 381 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms