Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 APOOP1-201ENST00000604695 592 ntBASIC1.96□□□□□ -2.1
NPAS2Q99743 MIR3974-201ENST00000637126 96 ntBASIC1.96□□□□□ -2.1
NPAS2Q99743 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
NPAS2Q99743 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
NPAS2Q99743 AC008555.8-201ENST00000623602 2168 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 SNORD3E-201ENST00000362899 217 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 RNU6-1159P-201ENST00000362933 107 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 U8.3-201ENST00000363321 132 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 RNY3P9-201ENST00000384727 106 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 MIR558-201ENST00000384920 94 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 MIR186-201ENST00000384988 86 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
NPAS2Q99743 MIR764-201ENST00000390811 85 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 SNORA40.3-201ENST00000390964 122 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 SNORA46.1-201ENST00000391069 153 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 AL512604.1-201ENST00000404812 257 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 GSTA9P-201ENST00000406231 611 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 RPS3AP3-201ENST00000411933 242 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 AC090960.1-201ENST00000421072 306 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 AL591806.2-201ENST00000433122 173 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 AC104850.1-201ENST00000435940 476 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 MTND2P4-201ENST00000445034 1004 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.95□□□□□ -2.1
NPAS2Q99743 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NPAS2Q99743 snoU13.23-201ENST00000458863 104 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.95□□□□□ -2.1
NPAS2Q99743 AC108078.2-201ENST00000510750 236 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 AC091965.2-201ENST00000512324 613 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 RNU2-53P-201ENST00000516257 147 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 RNU6-586P-201ENST00000517265 104 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 MTND2P38-201ENST00000522536 667 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NPAS2Q99743 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.95□□□□□ -2.1
NPAS2Q99743 AC135279.1-201ENST00000543493 504 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 AC026271.5-201ENST00000577873 130 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 uc_338.15-201ENST00000615470 191 ntBASIC1.95□□□□□ -2.1
NPAS2Q99743 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
NPAS2Q99743 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
NPAS2Q99743 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
NPAS2Q99743 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
NPAS2Q99743 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NPAS2Q99743 AC092881.1-201ENST00000638218 2733 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 FGF7P2-201ENST00000332473 296 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 RNU1-23P-201ENST00000363361 144 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 RNU6-529P-201ENST00000363383 104 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
NPAS2Q99743 RNU6-622P-201ENST00000384272 103 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 MIR10A-201ENST00000385043 110 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 RPS3AP36-201ENST00000398190 775 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 SUMO2P12-201ENST00000405924 140 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 RN7SKP142-201ENST00000411236 328 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 AL139156.1-201ENST00000412785 841 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 UBE2V1P10-201ENST00000414685 269 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 ELOCP4-201ENST00000420090 333 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.94□□□□□ -2.1
NPAS2Q99743 ISCA1P6-201ENST00000427740 390 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.94□□□□□ -2.1
NPAS2Q99743 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.94□□□□□ -2.1
NPAS2Q99743 AL445646.1-201ENST00000431784 216 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.94□□□□□ -2.1
NPAS2Q99743 MTCO3P5-201ENST00000433620 714 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
NPAS2Q99743 AC006026.2-201ENST00000457376 180 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.94□□□□□ -2.1
NPAS2Q99743 AC015712.3-201ENST00000559380 164 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 AC093249.1-201ENST00000567049 203 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 AC005771.1-201ENST00000585581 349 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 AL109918.3-201ENST00000603072 338 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 AL590229.1-201ENST00000603497 542 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 SEPT7P9-203ENST00000604116 343 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 AL158032.1-201ENST00000605401 106 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 AC025754.2-201ENST00000606491 432 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 AL451064.1-201ENST00000607718 471 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 DUXAP9-208ENST00000622815 614 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 AC110994.2-201ENST00000635481 492 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 AP006437.1-201ENST00000641440 3685 ntBASIC1.94□□□□□ -2.1
NPAS2Q99743 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.94□□□□□ -2.1
NPAS2Q99743 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
NPAS2Q99743 OR4G2P-201ENST00000328113 903 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NPAS2Q99743 CISD1P1-201ENST00000393907 327 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 RPL23AP32-201ENST00000395315 459 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 RNU2-39P-201ENST00000410604 198 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.93□□□□□ -2.1
NPAS2Q99743 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
NPAS2Q99743 RN7SL274P-201ENST00000492268 272 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 HMGB1P35-201ENST00000503360 598 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.93□□□□□ -2.1
NPAS2Q99743 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.93□□□□□ -2.1
NPAS2Q99743 AC117522.1-201ENST00000509821 380 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 RNU6-123P-201ENST00000516163 102 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 MIR514B-201ENST00000516774 80 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 HSPE1P18-201ENST00000517602 280 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 AC022616.3-201ENST00000523940 148 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 AC137800.2-201ENST00000574375 120 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 MTCYBP33-201ENST00000575007 1130 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.93□□□□□ -2.1
NPAS2Q99743 AC110760.3-201ENST00000598794 467 ntBASIC1.93□□□□□ -2.1
NPAS2Q99743 SNRPGP17-201ENST00000603780 214 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms