Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 AC024405.2-202ENST00000532731 184 ntBASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 MIR5701-3-201ENST00000578890 82 ntBASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 MIR3690-201ENST00000580266 75 ntBASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 MIR4300-201ENST00000581016 96 ntBASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 MIR5701-1-201ENST00000585138 82 ntBASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 MIR5701-2-201ENST00000615634 82 ntBASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 U6.98-201ENST00000637157 84 ntBASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 AC091152.2-201ENST00000591628 2569 ntBASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 MIR335-201ENST00000362173 94 ntBASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 Y_RNA.76-201ENST00000362931 109 ntBASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 Y_RNA.143-201ENST00000363520 106 ntBASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-335P-201ENST00000364563 113 ntBASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-102P-201ENST00000384485 104 ntBASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 RN7SKP51-201ENST00000410781 304 ntBASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 AC063979.1-201ENST00000415539 377 ntBASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 COX6CP10-201ENST00000416832 224 ntBASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 YME1L1P1-201ENST00000429435 297 ntBASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 AL138752.1-201ENST00000452964 351 ntBASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 AC067942.3-201ENST00000512025 362 ntBASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 AC069113.1-201ENST00000517763 267 ntBASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.7□□□□□ -1.82
CDK5RAP1Q96SZ6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 Z75746.1-201ENST00000440243 2080 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 RNA5SP295-201ENST00000362655 121 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU1-76P-201ENST00000362903 159 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 Y_RNA.83-201ENST00000363005 113 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 RNA5SP50-201ENST00000363731 107 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-682P-201ENST00000363843 106 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 RNA5SP72-201ENST00000364442 117 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 Y_RNA.324-201ENST00000365165 102 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 MIR521-1-201ENST00000384902 87 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 SNORD115-46-201ENST00000390982 71 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 AP000567.1-201ENST00000406413 156 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 RN7SKP111-201ENST00000410349 271 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-607P-201ENST00000411283 108 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 RPS15AP6-201ENST00000420703 385 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 AC096920.1-201ENST00000423991 241 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 EIF1P2-201ENST00000428233 350 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 AC090774.1-201ENST00000435925 246 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 CYCSP35-201ENST00000451978 304 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 U8.22-201ENST00000459141 133 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 RN7SL293P-201ENST00000481765 281 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 RPL7P23-201ENST00000493874 747 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 AL359273.1-201ENST00000510918 627 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 AC074250.1-201ENST00000511117 192 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-861P-201ENST00000516745 106 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-1212P-201ENST00000517023 104 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 CBX3P4-201ENST00000538909 354 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 OR4H12P-201ENST00000556269 907 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 LRRC37A5P-203ENST00000580181 585 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 AC174048.1-201ENST00000603389 144 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 MIR376A1-201ENST00000616574 68 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 AC012314.7-201ENST00000619693 93 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 U6.92-201ENST00000636464 89 ntBASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDK5RAP1Q96SZ6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDK5RAP1Q96SZ6 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDK5RAP1Q96SZ6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDK5RAP1Q96SZ6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CDK5RAP1Q96SZ6 Y_RNA.170-201ENST00000363746 110 ntBASIC3.68□□□□□ -1.82
CDK5RAP1Q96SZ6 SNORD113-1-201ENST00000365321 69 ntBASIC3.68□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-933P-201ENST00000384424 107 ntBASIC3.68□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-1179P-201ENST00000384667 107 ntBASIC3.68□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU6-821P-201ENST00000390995 107 ntBASIC3.68□□□□□ -1.82
CDK5RAP1Q96SZ6 Y_RNA.602-201ENST00000410535 92 ntBASIC3.68□□□□□ -1.82
CDK5RAP1Q96SZ6 PPP1R11P2-201ENST00000423543 382 ntBASIC3.68□□□□□ -1.82
CDK5RAP1Q96SZ6 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDK5RAP1Q96SZ6 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.68□□□□□ -1.82
CDK5RAP1Q96SZ6 SERF1AP1-201ENST00000514575 187 ntBASIC3.68□□□□□ -1.82
CDK5RAP1Q96SZ6 SNORA31.3-201ENST00000516029 96 ntBASIC3.68□□□□□ -1.82
CDK5RAP1Q96SZ6 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms