Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.06□□□□□ -1.92
SIN3AQ96ST3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.06□□□□□ -1.92
SIN3AQ96ST3 SRIP2-201ENST00000428470 166 ntBASIC3.06□□□□□ -1.92
SIN3AQ96ST3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SIN3AQ96ST3 USP9YP8-201ENST00000441913 500 ntBASIC3.06□□□□□ -1.92
SIN3AQ96ST3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.06□□□□□ -1.92
SIN3AQ96ST3 RPL21P99-201ENST00000480369 423 ntBASIC3.06□□□□□ -1.92
SIN3AQ96ST3 MTCYBP18-201ENST00000501056 747 ntBASIC3.06□□□□□ -1.92
SIN3AQ96ST3 RNU6-1038P-201ENST00000516516 104 ntBASIC3.06□□□□□ -1.92
SIN3AQ96ST3 RNU6-56P-201ENST00000516986 93 ntBASIC3.06□□□□□ -1.92
SIN3AQ96ST3 BNIP3P6-201ENST00000549284 499 ntBASIC3.06□□□□□ -1.92
SIN3AQ96ST3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.06□□□□□ -1.92
SIN3AQ96ST3 MTCO3P23-201ENST00000561363 289 ntBASIC3.06□□□□□ -1.92
SIN3AQ96ST3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.06□□□□□ -1.92
SIN3AQ96ST3 MIR3945-201ENST00000581853 98 ntBASIC3.06□□□□□ -1.92
SIN3AQ96ST3 MTND4P35-201ENST00000604257 1375 ntBASIC3.06□□□□□ -1.92
SIN3AQ96ST3 RNU6-89P-201ENST00000606519 100 ntBASIC3.06□□□□□ -1.92
SIN3AQ96ST3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
SIN3AQ96ST3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SIN3AQ96ST3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SIN3AQ96ST3 Y_RNA.167-201ENST00000363735 109 ntBASIC3.05□□□□□ -1.92
SIN3AQ96ST3 Y_RNA.390-201ENST00000383932 102 ntBASIC3.05□□□□□ -1.92
SIN3AQ96ST3 RNU6-393P-201ENST00000384475 107 ntBASIC3.05□□□□□ -1.92
SIN3AQ96ST3 SNORA40C-201ENST00000391285 128 ntBASIC3.05□□□□□ -1.92
SIN3AQ96ST3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.05□□□□□ -1.92
SIN3AQ96ST3 DPH3P2-201ENST00000422618 250 ntBASIC3.05□□□□□ -1.92
SIN3AQ96ST3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SIN3AQ96ST3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.05□□□□□ -1.92
SIN3AQ96ST3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.05□□□□□ -1.92
SIN3AQ96ST3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.05□□□□□ -1.92
SIN3AQ96ST3 AL714022.1-201ENST00000439897 151 ntBASIC3.05□□□□□ -1.92
SIN3AQ96ST3 BRK1P2-201ENST00000442875 223 ntBASIC3.05□□□□□ -1.92
SIN3AQ96ST3 HMGN2P26-201ENST00000463169 339 ntBASIC3.05□□□□□ -1.92
SIN3AQ96ST3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.05□□□□□ -1.92
SIN3AQ96ST3 RPS29P20-201ENST00000489592 171 ntBASIC3.05□□□□□ -1.92
SIN3AQ96ST3 MTND3P25-201ENST00000509243 135 ntBASIC3.05□□□□□ -1.92
SIN3AQ96ST3 AC104136.1-201ENST00000512969 394 ntBASIC3.05□□□□□ -1.92
SIN3AQ96ST3 LRRC34P2-201ENST00000514850 553 ntBASIC3.05□□□□□ -1.92
SIN3AQ96ST3 RNU6-358P-201ENST00000516564 75 ntBASIC3.05□□□□□ -1.92
SIN3AQ96ST3 SNORA31.19-201ENST00000517079 126 ntBASIC3.05□□□□□ -1.92
SIN3AQ96ST3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.05□□□□□ -1.92
SIN3AQ96ST3 IGKV3-31-201ENST00000523109 329 ntBASIC3.05□□□□□ -1.92
SIN3AQ96ST3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.05□□□□□ -1.92
SIN3AQ96ST3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.05□□□□□ -1.92
SIN3AQ96ST3 AC060780.3-201ENST00000589464 80 ntBASIC3.05□□□□□ -1.92
SIN3AQ96ST3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.05□□□□□ -1.92
SIN3AQ96ST3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SIN3AQ96ST3 Z82195.2-201ENST00000612348 18351 ntBASIC3.05□□□□□ -1.92
SIN3AQ96ST3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SIN3AQ96ST3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.05□□□□□ -1.92
SIN3AQ96ST3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SIN3AQ96ST3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SIN3AQ96ST3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SIN3AQ96ST3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.04□□□□□ -1.92
SIN3AQ96ST3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
SIN3AQ96ST3 RNU6-1303P-201ENST00000364841 107 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 Y_RNA.378-201ENST00000365652 113 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.04□□□□□ -1.92
SIN3AQ96ST3 RNU6-198P-201ENST00000384258 104 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 RNU6-166P-201ENST00000384371 107 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 RNU6-1179P-201ENST00000384667 107 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 RPL26P27-201ENST00000414397 437 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 BX682237.1-201ENST00000415016 335 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 AL353621.1-201ENST00000418219 243 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 AC098614.2-201ENST00000426040 255 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.04□□□□□ -1.92
SIN3AQ96ST3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SIN3AQ96ST3 AL353705.4-201ENST00000449661 238 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.04□□□□□ -1.92
SIN3AQ96ST3 RPS27AP10-201ENST00000496103 208 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 AC091885.1-201ENST00000506658 268 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.04□□□□□ -1.92
SIN3AQ96ST3 AC107222.1-201ENST00000510899 637 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 AC008716.1-201ENST00000511084 513 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 RNU1-86P-201ENST00000516108 154 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 SNORA31.11-201ENST00000516528 139 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 RNU1-107P-201ENST00000516617 154 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 RNU6-572P-201ENST00000516724 80 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 CENPUP1-201ENST00000526649 1202 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 OR11H5P-201ENST00000554039 926 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 MIR5692A1-201ENST00000580523 69 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 MTND4LP5-201ENST00000605152 292 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 Y_RNA.783-201ENST00000613546 102 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 AC022418.1-201ENST00000624118 445 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.04□□□□□ -1.92
SIN3AQ96ST3 AC010680.1-201ENST00000590024 3590 ntBASIC3.04□□□□□ -1.92
SIN3AQ96ST3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SIN3AQ96ST3 AC004520.1-201ENST00000608362 1413 ntBASIC3.03□□□□□ -1.92
SIN3AQ96ST3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SIN3AQ96ST3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SIN3AQ96ST3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SIN3AQ96ST3 RNA5SP160-201ENST00000364866 120 ntBASIC3.03□□□□□ -1.92
SIN3AQ96ST3 Z98749.2-208ENST00000381646 500 ntBASIC3.03□□□□□ -1.92
SIN3AQ96ST3 Y_RNA.399-201ENST00000383955 105 ntBASIC3.03□□□□□ -1.92
SIN3AQ96ST3 RNU6-434P-201ENST00000384376 107 ntBASIC3.03□□□□□ -1.92
SIN3AQ96ST3 RPL21P75-201ENST00000396599 483 ntBASIC3.03□□□□□ -1.92
SIN3AQ96ST3 RPL21P28-201ENST00000401418 483 ntBASIC3.03□□□□□ -1.92
SIN3AQ96ST3 SNORA11.2-201ENST00000408318 127 ntBASIC3.03□□□□□ -1.92
SIN3AQ96ST3 RNU2-3P-201ENST00000410144 191 ntBASIC3.03□□□□□ -1.92
SIN3AQ96ST3 HMGN2P30-201ENST00000423237 256 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms