Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
VTI1AQ96AJ9 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 RNA5SP295-201ENST00000362655 121 ntBASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 RNA5SP361-201ENST00000362686 118 ntBASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 Y_RNA.76-201ENST00000362931 109 ntBASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 Y_RNA.83-201ENST00000363005 113 ntBASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 RNU6-879P-201ENST00000364328 108 ntBASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 SNORD32A-201ENST00000364805 84 ntBASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 SNORD63-201ENST00000384262 68 ntBASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 MIR1911-201ENST00000410783 80 ntBASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 AC005002.2-201ENST00000438228 269 ntBASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 SNORA71B-202ENST00000439232 272 ntBASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 RPS15AP7-201ENST00000439294 405 ntBASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 AC087477.1-201ENST00000465747 340 ntBASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 RPS29P19-201ENST00000479709 171 ntBASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 RPL30P5-201ENST00000494923 336 ntBASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 RN7SKP289-201ENST00000517244 295 ntBASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 CYP4A43P-201ENST00000568156 121 ntBASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 AC008739.3-201ENST00000603262 127 ntBASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 SNORA43.4-201ENST00000629559 138 ntBASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.72□□□□□ -1.65
VTI1AQ96AJ9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
VTI1AQ96AJ9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.65
VTI1AQ96AJ9 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 Y_RNA.286-201ENST00000364813 102 ntBASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 Y_RNA.333-201ENST00000365274 102 ntBASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 RNU1-139P-201ENST00000391307 165 ntBASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 RPS4XP3-201ENST00000398541 413 ntBASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 SSXP4-201ENST00000451349 245 ntBASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 Y_RNA.644-201ENST00000459006 113 ntBASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 Y_RNA.674-201ENST00000516362 113 ntBASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 RNU6-1282P-201ENST00000516735 96 ntBASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 AC090281.1-201ENST00000523019 276 ntBASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 CBX3P4-201ENST00000538909 354 ntBASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 AC069240.1-201ENST00000548774 375 ntBASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
VTI1AQ96AJ9 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 RNU4-90P-201ENST00000362773 141 ntBASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 RNU1-73P-201ENST00000383971 164 ntBASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 SNORA29-201ENST00000384183 140 ntBASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 UBA52P6-201ENST00000399822 382 ntBASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 EIF1AXP1-201ENST00000419267 435 ntBASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 AL445584.1-201ENST00000431451 330 ntBASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 AL445305.1-201ENST00000432577 575 ntBASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 AC006026.2-201ENST00000457376 180 ntBASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 SNRPGP3-201ENST00000469405 227 ntBASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 MED28P2-201ENST00000475771 317 ntBASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 AL110115.1-201ENST00000614396 364 ntBASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 MIR6500-201ENST00000622700 86 ntBASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 AC127459.3-201ENST00000624328 466 ntBASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 AC016588.2-201ENST00000632484 3021 ntBASIC4.7□□□□□ -1.66
VTI1AQ96AJ9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 SNORA71.3-201ENST00000362582 128 ntBASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 SNORD116-20-201ENST00000384529 92 ntBASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 MIR153-2-201ENST00000385225 87 ntBASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 Y_RNA.793-201ENST00000411222 111 ntBASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 RPL26P27-201ENST00000414397 437 ntBASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 RNU6-1114P-201ENST00000516022 107 ntBASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 RNU6-789P-201ENST00000517105 102 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms