Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC023043.3-201ENST00000593113 385 ntBASIC2.68□□□□□ -1.98
TM9SF4Q92544 AC243960.4-201ENST00000600532 288 ntBASIC2.68□□□□□ -1.98
TM9SF4Q92544 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.68□□□□□ -1.98
TM9SF4Q92544 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.68□□□□□ -1.98
TM9SF4Q92544 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.68□□□□□ -1.98
TM9SF4Q92544 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
TM9SF4Q92544 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TM9SF4Q92544 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.67□□□□□ -1.98
TM9SF4Q92544 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TM9SF4Q92544 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.67□□□□□ -1.98
TM9SF4Q92544 MIR449A-201ENST00000362113 91 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 Y_RNA.58-201ENST00000362807 102 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 Y_RNA.154-201ENST00000363624 102 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 RNY3P1-201ENST00000365085 102 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 RNY3-201ENST00000365484 102 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 Y_RNA.490-201ENST00000384413 102 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 RPL7P37-201ENST00000425095 738 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.67□□□□□ -1.98
TM9SF4Q92544 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.67□□□□□ -1.98
TM9SF4Q92544 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.67□□□□□ -1.98
TM9SF4Q92544 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.67□□□□□ -1.98
TM9SF4Q92544 AL583843.1-201ENST00000456070 346 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 RN7SL429P-201ENST00000479090 223 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 RN7SL489P-201ENST00000486185 223 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 RN7SL327P-201ENST00000488659 223 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.67□□□□□ -1.98
TM9SF4Q92544 AC008716.1-201ENST00000511084 513 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 Y_RNA.682-201ENST00000516457 100 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 RNU6-928P-201ENST00000516876 104 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 SNORA31.19-201ENST00000517079 126 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 COPS8P3-201ENST00000526024 482 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.67□□□□□ -1.98
TM9SF4Q92544 AC005668.1-201ENST00000571142 476 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 MIR5692A1-201ENST00000580523 69 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 NUTF2P8-201ENST00000604593 363 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 AC123912.5-201ENST00000605470 343 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 RN7SL853P-201ENST00000617250 223 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 MIR1302-1-201ENST00000637932 143 ntBASIC2.67□□□□□ -1.98
TM9SF4Q92544 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.67□□□□□ -1.98
TM9SF4Q92544 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.67□□□□□ -1.98
TM9SF4Q92544 AL359693.1-201ENST00000614959 2407 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.66□□□□□ -1.98
TM9SF4Q92544 AC062016.1-201ENST00000355719 319 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 Y_RNA.135-201ENST00000363439 95 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 Y_RNA.212-201ENST00000364177 102 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 SNORD14B-201ENST00000364533 90 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 Y_RNA.813-201ENST00000364639 102 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 MIR196B-201ENST00000384852 84 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
TM9SF4Q92544 RNA5SP252-201ENST00000391131 119 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 SNORA40C-201ENST00000391285 128 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 MIR450B-201ENST00000401182 78 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 RNU4-14P-201ENST00000410858 122 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 RNU2-68P-201ENST00000410878 191 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 VN1R36P-201ENST00000414936 291 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.66□□□□□ -1.98
TM9SF4Q92544 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.66□□□□□ -1.98
TM9SF4Q92544 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.66□□□□□ -1.98
TM9SF4Q92544 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 NIPA2P5-201ENST00000452282 464 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.66□□□□□ -1.98
TM9SF4Q92544 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.66□□□□□ -1.98
TM9SF4Q92544 AC011005.2-201ENST00000487324 359 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 RNU6-323P-201ENST00000521915 107 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.66□□□□□ -1.98
TM9SF4Q92544 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.66□□□□□ -1.98
TM9SF4Q92544 AP005639.2-201ENST00000527592 928 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TM9SF4Q92544 AL355375.2-201ENST00000574825 175 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.66□□□□□ -1.98
TM9SF4Q92544 HSPE1P7-201ENST00000604681 321 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 AC116312.1-201ENST00000606841 314 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 FTX_3.1-201ENST00000610451 147 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 AC104237.2-201ENST00000612456 443 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TM9SF4Q92544 AL138726.1-201ENST00000614873 333 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 uc_338.15-201ENST00000615470 191 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 RMST_4.1-201ENST00000616886 107 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 AC138627.2-201ENST00000624202 601 ntBASIC2.66□□□□□ -1.98
TM9SF4Q92544 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
TM9SF4Q92544 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.66□□□□□ -1.98
TM9SF4Q92544 AC006026.1-201ENST00000444025 1803 ntBASIC2.65□□□□□ -1.98
TM9SF4Q92544 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.98
TM9SF4Q92544 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TM9SF4Q92544 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TM9SF4Q92544 RPL9P7-201ENST00000330965 580 ntBASIC2.65□□□□□ -1.99
TM9SF4Q92544 RNA5SP139-201ENST00000364340 117 ntBASIC2.65□□□□□ -1.99
TM9SF4Q92544 Y_RNA.339-201ENST00000365325 102 ntBASIC2.65□□□□□ -1.99
TM9SF4Q92544 RNU6-166P-201ENST00000384371 107 ntBASIC2.65□□□□□ -1.99
TM9SF4Q92544 Y_RNA.535-201ENST00000384612 99 ntBASIC2.65□□□□□ -1.99
TM9SF4Q92544 RPL21P75-201ENST00000396599 483 ntBASIC2.65□□□□□ -1.99
TM9SF4Q92544 RPL21P28-201ENST00000401418 483 ntBASIC2.65□□□□□ -1.99
TM9SF4Q92544 MIR548F5-201ENST00000408421 86 ntBASIC2.65□□□□□ -1.99
TM9SF4Q92544 TMEM167AP1-201ENST00000423409 219 ntBASIC2.65□□□□□ -1.99
TM9SF4Q92544 AL590632.1-201ENST00000424289 371 ntBASIC2.65□□□□□ -1.99
TM9SF4Q92544 SKA2P1-201ENST00000425592 390 ntBASIC2.65□□□□□ -1.99
TM9SF4Q92544 HMGB1P9-201ENST00000429856 646 ntBASIC2.65□□□□□ -1.99
TM9SF4Q92544 RPL32P28-201ENST00000443577 397 ntBASIC2.65□□□□□ -1.99
TM9SF4Q92544 AC233279.1-201ENST00000455300 423 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms