Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL513043.1-201ENST00000439124 535 ntBASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 AL358232.1-201ENST00000448030 501 ntBASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 RPL9P9-202ENST00000466501 579 ntBASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 RN7SKP295-201ENST00000517264 153 ntBASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 AC103996.1-201ENST00000555468 102 ntBASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 LINC00933-203ENST00000559812 219 ntBASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 AC008739.3-201ENST00000603262 127 ntBASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 AC018889.1-201ENST00000605372 397 ntBASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 MIR3976-201ENST00000606807 139 ntBASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 RNU6-78P-201ENST00000362897 107 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 U8.8-201ENST00000365399 135 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 RNU6-639P-201ENST00000384074 107 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 MIR518D-201ENST00000385014 87 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 AL357075.1-201ENST00000404107 726 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 NDUFS5P4-201ENST00000412983 318 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 RPL23AP50-201ENST00000434149 455 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 AC098831.1-201ENST00000440661 216 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 AC011816.1-201ENST00000441346 546 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 BTF3P15-201ENST00000455606 336 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 RPL21P10-201ENST00000463521 490 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 AC022493.2-201ENST00000506122 481 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 AK3P2-201ENST00000507976 429 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 RNU6-377P-201ENST00000515965 102 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 AP004607.1-201ENST00000524456 203 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 MIR4444-1-201ENST00000581696 74 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 MIR3609-201ENST00000582661 80 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 MIR4444-2-201ENST00000584390 74 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 AC008962.1-201ENST00000605729 304 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 AL162730.1-201ENST00000605734 292 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 AC116312.1-201ENST00000606841 314 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 AC002076.2-201ENST00000617362 122 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 MIR6076-201ENST00000617521 113 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 U4.7-201ENST00000638126 106 ntBASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
ATG4AQ8WYN0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 RNU6-428P-201ENST00000362942 107 ntBASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 Y_RNA.148-201ENST00000363557 117 ntBASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 RNU6-898P-201ENST00000365627 104 ntBASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 MIR449B-201ENST00000384995 97 ntBASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 AC099548.1-201ENST00000421443 426 ntBASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 HIGD1AP2-201ENST00000446367 280 ntBASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 AL590664.1-201ENST00000448065 339 ntBASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 AC133134.1-201ENST00000466800 359 ntBASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 AC128713.1-201ENST00000471495 306 ntBASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 RN7SL293P-201ENST00000481765 281 ntBASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 RPS27AP10-201ENST00000496103 208 ntBASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 HSPE1P7-201ENST00000604681 321 ntBASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 AC005046.1-201ENST00000608515 625 ntBASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 AC073308.1-201ENST00000623696 305 ntBASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
ATG4AQ8WYN0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 AC117470.1-201ENST00000381974 330 ntBASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 AC096664.2-201ENST00000411843 406 ntBASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 MCFD2P1-201ENST00000417812 300 ntBASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 BX276092.3-201ENST00000424182 230 ntBASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 AC006026.2-201ENST00000457376 180 ntBASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 RPL32P34-201ENST00000486380 400 ntBASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 AC114801.2-201ENST00000503825 781 ntBASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 RNU6-120P-201ENST00000516077 103 ntBASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 RNU6-699P-201ENST00000517081 110 ntBASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 RNU6-264P-201ENST00000517134 104 ntBASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 BNIP3P16-201ENST00000589779 534 ntBASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 SRGNP1-201ENST00000603392 451 ntBASIC3.22□□□□□ -1.89
ATG4AQ8WYN0 AC083806.3-201ENST00000614016 455 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms