Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC130509.1-201ENST00000464158 433 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 RPL7P42-201ENST00000481005 679 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 RNU6-559P-201ENST00000516151 98 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 SNORD27.1-201ENST00000516319 72 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 RNU2-10P-201ENST00000516375 211 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 OR11H5P-201ENST00000554039 926 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 OR4H12P-201ENST00000556269 907 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.82□□□□□ -1.96
SNED1Q8TER0 AL022345.1-201ENST00000607292 135 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 AC103710.2-201ENST00000609912 942 ntBASIC2.82□□□□□ -1.96
SNED1Q8TER0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.82□□□□□ -1.96
SNED1Q8TER0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.82□□□□□ -1.96
SNED1Q8TER0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.82□□□□□ -1.96
SNED1Q8TER0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.82□□□□□ -1.96
SNED1Q8TER0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.82□□□□□ -1.96
SNED1Q8TER0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SNED1Q8TER0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
SNED1Q8TER0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.81□□□□□ -1.96
SNED1Q8TER0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
SNED1Q8TER0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.81□□□□□ -1.96
SNED1Q8TER0 Y_RNA.22-201ENST00000362492 102 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 RNU5A-8P-201ENST00000364102 114 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 SNORA62.1-201ENST00000364287 154 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 RNU4-20P-201ENST00000365601 151 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.81□□□□□ -1.96
SNED1Q8TER0 RNU6-1013P-201ENST00000384180 107 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 RNU6-1160P-201ENST00000384546 104 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.81□□□□□ -1.96
SNED1Q8TER0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.81□□□□□ -1.96
SNED1Q8TER0 RPS29P15-201ENST00000458329 171 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 Y_RNA.631-201ENST00000459607 101 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 AC108860.1-201ENST00000484521 383 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 AC090096.1-201ENST00000489168 390 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 AC116562.3-201ENST00000506136 177 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 FAM206BP-201ENST00000510179 541 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.81□□□□□ -1.96
SNED1Q8TER0 HMGB1P41-201ENST00000520234 440 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.81□□□□□ -1.96
SNED1Q8TER0 AC068587.5-201ENST00000528506 175 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 MIR4775-201ENST00000581168 75 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.81□□□□□ -1.96
SNED1Q8TER0 AC023043.3-201ENST00000593113 385 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 AL022099.1-201ENST00000604551 712 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 AL031176.1-201ENST00000604554 466 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 AL590099.1-201ENST00000615276 138 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 AL353748.2-201ENST00000622148 471 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 MTND4LP32-201ENST00000636111 270 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 MTND5P42-201ENST00000637720 498 ntBASIC2.81□□□□□ -1.96
SNED1Q8TER0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNED1Q8TER0 MTND4P14-201ENST00000435799 1354 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNED1Q8TER0 RNU6-799P-201ENST00000363567 107 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 Y_RNA.226-201ENST00000364337 114 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 Y_RNA.301-201ENST00000364990 103 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 SNORD42.2-201ENST00000365570 69 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 RNU6-641P-201ENST00000384006 107 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 MIR514A2-201ENST00000385131 88 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 MIR514A3-201ENST00000385132 88 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 RNU2-29P-201ENST00000410423 189 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 RNU2-39P-201ENST00000410604 198 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 MED13P1-201ENST00000428342 171 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 AL353691.1-201ENST00000451332 387 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.8□□□□□ -1.96
SNED1Q8TER0 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.8□□□□□ -1.96
SNED1Q8TER0 RPL7P5-201ENST00000471472 736 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 AL163540.1-201ENST00000485382 386 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SNED1Q8TER0 COX7A2P2-201ENST00000505291 250 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.8□□□□□ -1.96
SNED1Q8TER0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.8□□□□□ -1.96
SNED1Q8TER0 Y_RNA.665-201ENST00000516177 98 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 Y_RNA.682-201ENST00000516457 100 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 Y_RNA.718-201ENST00000517110 102 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 HSPE1P18-201ENST00000517602 280 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.8□□□□□ -1.96
SNED1Q8TER0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.8□□□□□ -1.96
SNED1Q8TER0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.8□□□□□ -1.96
SNED1Q8TER0 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.8□□□□□ -1.96
SNED1Q8TER0 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.8□□□□□ -1.96
SNED1Q8TER0 SETP7-201ENST00000552169 453 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 POLR3GP2-201ENST00000588366 668 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 AC008737.2-201ENST00000599446 118 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 SNRPGP17-201ENST00000603780 214 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 AC080078.3-201ENST00000605407 463 ntBASIC2.8□□□□□ -1.96
SNED1Q8TER0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.8□□□□□ -1.96
SNED1Q8TER0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
SNED1Q8TER0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SNED1Q8TER0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.79□□□□□ -1.96
SNED1Q8TER0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNED1Q8TER0 FAM35CP-201ENST00000554755 2470 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 AL161431.1-201ENST00000618966 4205 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SNED1Q8TER0 RNU6-552P-201ENST00000362869 119 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 RNU6-1155P-201ENST00000363554 107 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
SNED1Q8TER0 RNU6-1027P-201ENST00000383998 107 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 RNU6-1029P-201ENST00000384109 107 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 RNU6-1297P-201ENST00000384415 104 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 RNU2-2P-201ENST00000410396 191 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms