Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNA5SP112-201ENST00000515937 99 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 MIR892C-201ENST00000516410 77 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 RNA5SP24-201ENST00000516478 95 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-506P-201ENST00000516553 94 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 RNU7-193P-201ENST00000516723 65 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AC104383.1-201ENST00000530297 370 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 CBX3P7-201ENST00000532876 502 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AP003034.1-201ENST00000534621 422 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 HIF1AP1-201ENST00000553642 175 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 MIR5583-1-201ENST00000580941 59 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AC105245.1-201ENST00000581934 244 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AL670379.10-201ENST00000604330 253 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AL670379.9-201ENST00000605428 253 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AC087045.1-201ENST00000605856 382 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AC069294.1-201ENST00000608397 350 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AL359880.1-201ENST00000621879 266 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 MIR1291-201ENST00000627649 87 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 MIR7157-201ENST00000635801 60 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 Y_RNA.3-201ENST00000362331 103 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-486P-201ENST00000363116 107 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-1322P-201ENST00000364309 107 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 Y_RNA.255-201ENST00000364581 97 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 Y_RNA.372-201ENST00000365599 102 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-393P-201ENST00000384475 107 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 MIR17-201ENST00000385012 84 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 MIR34A-201ENST00000385130 110 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AL445529.1-201ENST00000398713 389 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AL359511.1-201ENST00000402970 211 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AL353621.1-201ENST00000418219 243 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 TOMM20P4-201ENST00000427861 435 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AL669831.1-202ENST00000428504 417 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 MICF-203ENST00000432679 129 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 GTF2IP13-201ENST00000438487 386 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AC016691.1-201ENST00000441321 413 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 HIGD1AP2-201ENST00000446367 280 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 RPL7P12-201ENST00000446719 750 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 NDUFB1P2-201ENST00000449477 176 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 SNORD109B-201ENST00000458961 67 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 SNORD109A-201ENST00000459128 67 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AL163973.1-201ENST00000484753 577 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-720P-201ENST00000516363 108 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 Y_RNA.687-201ENST00000516558 91 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AC016957.1-201ENST00000534895 309 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AL512360.1-201ENST00000555346 234 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AC027807.1-201ENST00000559921 996 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AC234778.2-201ENST00000566241 354 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 ELOCP29-201ENST00000588193 334 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AP001330.5-201ENST00000607176 411 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AF250324.2-201ENST00000608299 610 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 AC016717.2-201ENST00000609089 5141 ntBASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC71LQ8N9Z2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-1303P-201ENST00000364841 107 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 SNORA69-201ENST00000383895 132 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-72P-201ENST00000384285 79 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-1127P-201ENST00000384580 107 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 SNORA46.1-201ENST00000391069 153 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 AL606923.1-201ENST00000406616 190 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 AL356379.1-201ENST00000414105 126 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 ARL5AP4-201ENST00000430731 512 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 PRPS1P1-201ENST00000445305 876 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 RPL22P13-201ENST00000493291 347 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 RNA5SP401-201ENST00000515920 127 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 RNA5SP320-201ENST00000516263 124 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 SNORA40.12-201ENST00000516329 111 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 Y_RNA.704-201ENST00000516851 102 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 BNIP3P30-201ENST00000601184 574 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms