Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AP000720.1-201ENST00000625091 483 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 AC073343.1-201ENST00000328239 651 ntBASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 Y_RNA.18-201ENST00000362461 102 ntBASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 RNU6-212P-201ENST00000362642 104 ntBASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 RNU4-62P-201ENST00000410125 130 ntBASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 RNU6-174P-201ENST00000410406 106 ntBASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 RPS15AP12-201ENST00000419498 388 ntBASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 snoU13.14-201ENST00000459372 104 ntBASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 AC023790.1-201ENST00000482174 347 ntBASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 AC116347.2-201ENST00000514912 523 ntBASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 AC022616.6-201ENST00000520479 119 ntBASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 AC107934.1-201ENST00000522215 217 ntBASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 AP003122.4-201ENST00000530980 758 ntBASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 AC018630.3-201ENST00000542637 96 ntBASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 MIR3198-2-201ENST00000577868 80 ntBASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 AC103987.3-201ENST00000582071 292 ntBASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 AC103810.8-201ENST00000607347 118 ntBASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 AC009269.6-201ENST00000621778 588 ntBASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 AC007792.1-201ENST00000623023 402 ntBASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 AL445984.1-201ENST00000637834 659 ntBASIC1.29□□□□□ -2.2
ZIC4Q8N9L1 AP000648.3-201ENST00000623539 4507 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 RNU1-58P-201ENST00000362413 163 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 SNORD14B-201ENST00000364533 90 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 RNU6-906P-201ENST00000384700 70 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 MIR597-201ENST00000384968 97 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 BTF3L4P2-201ENST00000392798 346 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 MIR934-201ENST00000401241 83 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 AC009310.1-201ENST00000414414 451 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 AC108667.1-201ENST00000428618 249 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 CALM1P1-201ENST00000442082 433 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 AP001025.1-201ENST00000486139 332 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 AC112206.3-201ENST00000514578 389 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 RNU6-970P-201ENST00000516312 107 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 MIR4285-201ENST00000581001 85 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 MIR548AC-201ENST00000585049 88 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 AC105148.1-201ENST00000604961 409 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 AC013244.3-201ENST00000605614 388 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 AL139022.2-201ENST00000606934 443 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 AC006927.4-201ENST00000639187 543 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 MTND4P9-201ENST00000507819 1346 ntBASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
ZIC4Q8N9L1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.28□□□□□ -2.21
ZIC4Q8N9L1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 MTND5P10-201ENST00000603719 1809 ntBASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 AC233981.2-201ENST00000611524 1614 ntBASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 SNORD3E-201ENST00000362899 217 ntBASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 RN7SKP51-201ENST00000410781 304 ntBASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 AC074117.2-201ENST00000417130 397 ntBASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 RPL37P21-201ENST00000435890 276 ntBASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 Y_RNA.675-201ENST00000516389 149 ntBASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 ADI1P3-201ENST00000549509 470 ntBASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 AL354943.1-201ENST00000572103 781 ntBASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 MIR4769-201ENST00000584126 77 ntBASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 AL158032.1-201ENST00000605401 106 ntBASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 AP002360.4-201ENST00000606980 481 ntBASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 RMST_6.1-201ENST00000611980 203 ntBASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 AL607023.1-201ENST00000620045 248 ntBASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.27□□□□□ -2.21
ZIC4Q8N9L1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 Y_RNA.40-201ENST00000362645 93 ntBASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 U8.1-201ENST00000362843 134 ntBASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 RNU6-1164P-201ENST00000364428 107 ntBASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 RNU6-809P-201ENST00000384461 107 ntBASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 AC068050.1-201ENST00000394891 380 ntBASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 RNA5SP501-201ENST00000410990 112 ntBASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 OR9R1P-201ENST00000412200 877 ntBASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 RPS27AP14-201ENST00000422868 454 ntBASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 AC137499.1-201ENST00000427602 88 ntBASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 MTND1P20-201ENST00000430341 950 ntBASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 MTND1P32-201ENST00000433043 938 ntBASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.26□□□□□ -2.21
ZIC4Q8N9L1 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms