Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC012493.2-201ENST00000595083 291 ntBASIC4.49□□□□□ -1.69
DEPDC4Q8N2C3 AC004832.4-201ENST00000608952 331 ntBASIC4.49□□□□□ -1.69
DEPDC4Q8N2C3 LINC00901.1-201ENST00000617252 152 ntBASIC4.49□□□□□ -1.69
DEPDC4Q8N2C3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.49□□□□□ -1.69
DEPDC4Q8N2C3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.49□□□□□ -1.69
DEPDC4Q8N2C3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
DEPDC4Q8N2C3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.49□□□□□ -1.69
DEPDC4Q8N2C3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.49□□□□□ -1.69
DEPDC4Q8N2C3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
DEPDC4Q8N2C3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 AL359854.1-201ENST00000614203 1594 ntBASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 UBE3AP2-201ENST00000429033 2259 ntBASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 RNU6-804P-201ENST00000384286 107 ntBASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 RNU1-106P-201ENST00000384382 164 ntBASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 MIR141-201ENST00000384975 95 ntBASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 SNORD96B-201ENST00000386148 79 ntBASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 RNA5SP372-201ENST00000390836 115 ntBASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 AL357139.1-201ENST00000407792 426 ntBASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 RNA5SP201-201ENST00000410316 124 ntBASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 AC096649.2-201ENST00000416186 393 ntBASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 AC024067.1-201ENST00000426199 223 ntBASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 UQCRHP4-201ENST00000471686 272 ntBASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 AC006517.1-201ENST00000480485 328 ntBASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 AC027176.1-201ENST00000560204 514 ntBASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 AL133393.1-201ENST00000603277 287 ntBASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 AL713866.2-201ENST00000603579 219 ntBASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 AP001485.1-201ENST00000604799 199 ntBASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 AC091905.4-201ENST00000623432 202 ntBASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
DEPDC4Q8N2C3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 Y_RNA.580-201ENST00000391004 95 ntBASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 BX323845.1-201ENST00000432417 179 ntBASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 SNRPGP5-201ENST00000456003 220 ntBASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 RN7SL41P-201ENST00000476144 297 ntBASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 AC103975.1-201ENST00000482506 483 ntBASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 AC108022.1-201ENST00000493466 478 ntBASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 RNU6-344P-201ENST00000516635 111 ntBASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 MIR4480-201ENST00000582492 71 ntBASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 AC006380.1-201ENST00000603598 186 ntBASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 PCGEM1.1-201ENST00000613431 131 ntBASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
DEPDC4Q8N2C3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.46□□□□□ -1.69
DEPDC4Q8N2C3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.46□□□□□ -1.69
DEPDC4Q8N2C3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 SNURFL-201ENST00000309296 343 ntBASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 AL357515.1-201ENST00000402967 542 ntBASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 RNA5SP146-201ENST00000410743 123 ntBASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 AL451074.5-201ENST00000415894 435 ntBASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 snoU13.20-201ENST00000459180 104 ntBASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 RN7SL817P-201ENST00000480777 288 ntBASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 RNU2-12P-201ENST00000517216 168 ntBASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 MTND5P41-201ENST00000517498 206 ntBASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 AP002001.1-203ENST00000534002 267 ntBASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 AC025884.1-201ENST00000556034 378 ntBASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 MIR548AI-201ENST00000579940 88 ntBASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 SNORA74C-1-201ENST00000580726 201 ntBASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 MIR3145-201ENST00000580727 82 ntBASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 DEFB117-201ENST00000602356 141 ntBASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 AC019206.1-201ENST00000621938 425 ntBASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 AC005086.4-201ENST00000623065 213 ntBASIC4.46□□□□□ -1.7
DEPDC4Q8N2C3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms