Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.92□□□□□ -2.1
CCDC50Q8IVM0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC50Q8IVM0 AC008993.2-201ENST00000631744 806 ntBASIC1.92□□□□□ -2.1
CCDC50Q8IVM0 RNU6-1010P-201ENST00000362757 107 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 SNORD115-7-201ENST00000365306 82 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 RNU6-116P-201ENST00000384042 109 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 MT-TH-201ENST00000387441 69 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 SNORA40.3-201ENST00000390964 122 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 AC019129.1-201ENST00000403786 261 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 RNU2-8P-201ENST00000410727 190 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 HMGN1P14-201ENST00000412459 517 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 SNORD56-201ENST00000413522 71 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 AL365203.2-201ENST00000423444 196 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 MTCO3P5-201ENST00000433620 714 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 AC009961.2-201ENST00000435771 251 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 HMGB1P31-201ENST00000437242 427 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 AC012308.1-201ENST00000451232 178 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 AC117503.1-201ENST00000472241 394 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 MTCO3P9-201ENST00000506989 781 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 SNORA48.11-201ENST00000517015 89 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 AC012414.6-201ENST00000568241 401 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 MIR4419B-201ENST00000577260 68 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 CLIC4P2-201ENST00000601934 717 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 AC098614.4-201ENST00000607601 462 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 AC087241.4-201ENST00000612441 480 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 uc_338.15-201ENST00000615470 191 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 AC091304.6-201ENST00000619761 202 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.91□□□□□ -2.1
CCDC50Q8IVM0 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 Y_RNA.367-201ENST00000365544 101 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 MIR561-201ENST00000385216 97 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 MIR23A-201ENST00000385245 73 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 AC074117.2-201ENST00000417130 397 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 MTCYBP5-201ENST00000423752 1135 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 RPL31P35-201ENST00000431058 377 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 RPL23AP42-201ENST00000471152 471 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 RPL30P12-201ENST00000474666 353 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 AC107032.1-201ENST00000485945 480 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 AC104806.1-201ENST00000508720 308 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 MTND1P22-201ENST00000510572 951 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 MRPS17P9-201ENST00000511924 393 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 RPL23AP94-201ENST00000512518 302 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 HSPE1P18-201ENST00000517602 280 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 RANP3-201ENST00000530970 276 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 OR5AL2P-201ENST00000532185 920 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 AC087883.1-201ENST00000551882 391 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 DEFB122-202ENST00000569013 197 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 AC010928.2-201ENST00000588017 287 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 AL031274.2-201ENST00000599419 203 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 ELOCP5-201ENST00000604924 333 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 AP003400.5-201ENST00000624827 617 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 AC090517.3-201ENST00000625170 141 ntBASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC50Q8IVM0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 RNA5SP276-201ENST00000362580 94 ntBASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 SNORD56.1-201ENST00000362913 68 ntBASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 Y_RNA.169-201ENST00000363745 96 ntBASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 SNORA62.1-201ENST00000364287 154 ntBASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 RNU6-1274P-201ENST00000384557 107 ntBASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 SNORA26.8-201ENST00000391306 124 ntBASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 HMGN2P39-201ENST00000398005 273 ntBASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 RN7SKP192-201ENST00000411291 327 ntBASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 MTND2P18-201ENST00000419962 1030 ntBASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 AC104058.1-201ENST00000448028 297 ntBASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 AL121594.1-201ENST00000475906 575 ntBASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 RPS29P21-201ENST00000496272 170 ntBASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 Y_RNA.717-201ENST00000517106 92 ntBASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 RNU6-586P-201ENST00000517265 104 ntBASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 AC034114.1-201ENST00000520293 285 ntBASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 AP002453.2-201ENST00000533503 320 ntBASIC1.89□□□□□ -2.11
CCDC50Q8IVM0 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms