Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 U2.5-201ENST00000619465 191 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 U2.10-201ENST00000620268 191 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 AC110994.2-201ENST00000635481 492 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 AL354685.2-201ENST00000448218 1447 ntBASIC1.83□□□□□ -2.12
NUDCD3Q8IVD9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 Y_RNA.40-201ENST00000362645 93 ntBASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 RNU4-21P-201ENST00000362802 126 ntBASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 SNORD115-7-201ENST00000365306 82 ntBASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 HMGN1P14-201ENST00000412459 517 ntBASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 C1DP2-201ENST00000418167 426 ntBASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 MTCO3P5-201ENST00000433620 714 ntBASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 AL022238.1-201ENST00000442557 355 ntBASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 AC096638.1-201ENST00000444678 216 ntBASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 AL136380.1-201ENST00000447970 162 ntBASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 AC104058.1-201ENST00000448028 297 ntBASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 RPL9P6-201ENST00000492764 598 ntBASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 RNA5SP137-201ENST00000516833 135 ntBASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 AC109329.1-201ENST00000518744 317 ntBASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 AC034114.1-201ENST00000520293 285 ntBASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 AC087883.1-201ENST00000551882 391 ntBASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 IMMP1LP2-201ENST00000552954 492 ntBASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 AC073539.2-201ENST00000597113 165 ntBASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 AL031274.2-201ENST00000599419 203 ntBASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 AC138649.3-201ENST00000622154 254 ntBASIC1.82□□□□□ -2.12
NUDCD3Q8IVD9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 AC008555.8-201ENST00000623602 2168 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 Y_RNA.367-201ENST00000365544 101 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 RNU5A-2P-201ENST00000384337 116 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 SNORA40.3-201ENST00000390964 122 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 SNORA3.2-201ENST00000408221 125 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 RNA5SP450-201ENST00000411206 102 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 RNU6-387P-201ENST00000411331 105 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 AC074117.2-201ENST00000417130 397 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 DPH3P2-201ENST00000422618 250 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 AL365400.1-201ENST00000431854 640 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 AC009961.2-201ENST00000435771 251 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 HMGB1P31-201ENST00000437242 427 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 GAPDHP17-201ENST00000449858 1001 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 PPP1R2P5-201ENST00000457256 603 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 AC104806.1-201ENST00000508720 308 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 MTND3P25-201ENST00000509243 135 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 LRRC34P1-201ENST00000542742 915 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 AC007375.1-201ENST00000554513 578 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 MIR5692A1-201ENST00000580523 69 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 MIR3682-201ENST00000581338 84 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 ELOCP5-201ENST00000604924 333 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 AC090517.3-201ENST00000625170 141 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 AC008993.2-201ENST00000631744 806 ntBASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
NUDCD3Q8IVD9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 RNU6-655P-201ENST00000362858 107 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 U3.13-201ENST00000364804 214 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 RNU6-116P-201ENST00000384042 109 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 MT-TH-201ENST00000387441 69 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 RPL31P63-201ENST00000422565 375 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 AL139415.2-201ENST00000431968 163 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 AL445567.1-201ENST00000439121 144 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 AC006026.2-201ENST00000457376 180 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 AL121594.1-201ENST00000475906 575 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 MTCO3P9-201ENST00000506989 781 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 AC008549.1-201ENST00000512900 643 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 RNU6-410P-201ENST00000517006 107 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 AC060788.1-201ENST00000521318 469 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 OR5AL2P-201ENST00000532185 920 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 AC098848.2-201ENST00000588023 330 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 AC005034.5-201ENST00000604219 466 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 AC026585.1-201ENST00000619582 524 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 AC091304.6-201ENST00000619761 202 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.8□□□□□ -2.12
NUDCD3Q8IVD9 RNU6-212P-201ENST00000362642 104 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 219.2 ms