Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 HMGB1P12-201ENST00000438594 598 ntBASIC4.47□□□□□ -1.69
USP31Q70CQ4 RNU7-169P-201ENST00000459456 61 ntBASIC4.47□□□□□ -1.69
USP31Q70CQ4 RPS4XP13-201ENST00000483219 789 ntBASIC4.47□□□□□ -1.69
USP31Q70CQ4 RPL23AP49-201ENST00000492925 468 ntBASIC4.47□□□□□ -1.69
USP31Q70CQ4 NDUFB4P9-201ENST00000511646 388 ntBASIC4.47□□□□□ -1.69
USP31Q70CQ4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.47□□□□□ -1.69
USP31Q70CQ4 HIGD1AP1-201ENST00000550979 275 ntBASIC4.47□□□□□ -1.69
USP31Q70CQ4 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.47□□□□□ -1.69
USP31Q70CQ4 AL355297.3-201ENST00000604082 446 ntBASIC4.47□□□□□ -1.69
USP31Q70CQ4 MIR1244-1-201ENST00000612829 85 ntBASIC4.47□□□□□ -1.69
USP31Q70CQ4 AC090617.7-201ENST00000623952 126 ntBASIC4.47□□□□□ -1.69
USP31Q70CQ4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.47□□□□□ -1.69
USP31Q70CQ4 MIR1244-3-201ENST00000635744 85 ntBASIC4.47□□□□□ -1.69
USP31Q70CQ4 MIR4272-201ENST00000635924 64 ntBASIC4.47□□□□□ -1.69
USP31Q70CQ4 MIR1244-2-201ENST00000636449 85 ntBASIC4.47□□□□□ -1.69
USP31Q70CQ4 MIR1244-4-202ENST00000636813 85 ntBASIC4.47□□□□□ -1.69
USP31Q70CQ4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.47□□□□□ -1.69
USP31Q70CQ4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
USP31Q70CQ4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
USP31Q70CQ4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USP31Q70CQ4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
USP31Q70CQ4 AL513302.2-201ENST00000562313 1842 ntBASIC4.46□□□□□ -1.69
USP31Q70CQ4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
USP31Q70CQ4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP31Q70CQ4 RNU6-595P-201ENST00000363944 107 ntBASIC4.46□□□□□ -1.7
USP31Q70CQ4 RNU4-42P-201ENST00000364738 142 ntBASIC4.46□□□□□ -1.7
USP31Q70CQ4 RNU6-702P-201ENST00000364982 107 ntBASIC4.46□□□□□ -1.7
USP31Q70CQ4 Y_RNA.510-201ENST00000384511 114 ntBASIC4.46□□□□□ -1.7
USP31Q70CQ4 RPL26P27-201ENST00000414397 437 ntBASIC4.46□□□□□ -1.7
USP31Q70CQ4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.46□□□□□ -1.7
USP31Q70CQ4 OR2AQ1P-201ENST00000451972 200 ntBASIC4.46□□□□□ -1.7
USP31Q70CQ4 MTCO3P8-201ENST00000453691 755 ntBASIC4.46□□□□□ -1.7
USP31Q70CQ4 U8.20-201ENST00000459445 131 ntBASIC4.46□□□□□ -1.7
USP31Q70CQ4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.46□□□□□ -1.7
USP31Q70CQ4 RNA5SP341-201ENST00000516261 117 ntBASIC4.46□□□□□ -1.7
USP31Q70CQ4 AP004607.1-201ENST00000524456 203 ntBASIC4.46□□□□□ -1.7
USP31Q70CQ4 AC006600.1-201ENST00000572529 153 ntBASIC4.46□□□□□ -1.7
USP31Q70CQ4 MIR2682-201ENST00000580305 110 ntBASIC4.46□□□□□ -1.7
USP31Q70CQ4 AC008962.1-201ENST00000605729 304 ntBASIC4.46□□□□□ -1.7
USP31Q70CQ4 AC005046.1-201ENST00000608515 625 ntBASIC4.46□□□□□ -1.7
USP31Q70CQ4 AC138627.2-201ENST00000624202 601 ntBASIC4.46□□□□□ -1.7
USP31Q70CQ4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
USP31Q70CQ4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USP31Q70CQ4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.46□□□□□ -1.7
USP31Q70CQ4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USP31Q70CQ4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP31Q70CQ4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
USP31Q70CQ4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
USP31Q70CQ4 RNU1-73P-201ENST00000383971 164 ntBASIC4.45□□□□□ -1.7
USP31Q70CQ4 YPEL5P1-201ENST00000419731 367 ntBASIC4.45□□□□□ -1.7
USP31Q70CQ4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.45□□□□□ -1.7
USP31Q70CQ4 RNU1-61P-201ENST00000516107 151 ntBASIC4.45□□□□□ -1.7
USP31Q70CQ4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.45□□□□□ -1.7
USP31Q70CQ4 CYCSP39-201ENST00000565821 309 ntBASIC4.45□□□□□ -1.7
USP31Q70CQ4 VN1R91P-201ENST00000594377 169 ntBASIC4.45□□□□□ -1.7
USP31Q70CQ4 AL033523.1-201ENST00000605153 153 ntBASIC4.45□□□□□ -1.7
USP31Q70CQ4 AC100812.1-201ENST00000607622 580 ntBASIC4.45□□□□□ -1.7
USP31Q70CQ4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
USP31Q70CQ4 AC066616.2-201ENST00000559334 1481 ntBASIC4.45□□□□□ -1.7
USP31Q70CQ4 SRP72P2-201ENST00000344851 1979 ntBASIC4.45□□□□□ -1.7
USP31Q70CQ4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP31Q70CQ4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.45□□□□□ -1.7
USP31Q70CQ4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP31Q70CQ4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USP31Q70CQ4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
USP31Q70CQ4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
USP31Q70CQ4 SNORA7.4-201ENST00000384249 137 ntBASIC4.44□□□□□ -1.7
USP31Q70CQ4 MIR628-201ENST00000385229 95 ntBASIC4.44□□□□□ -1.7
USP31Q70CQ4 SNORA69.1-201ENST00000390904 137 ntBASIC4.44□□□□□ -1.7
USP31Q70CQ4 MIR888-201ENST00000401186 77 ntBASIC4.44□□□□□ -1.7
USP31Q70CQ4 RPS29P13-201ENST00000402041 169 ntBASIC4.44□□□□□ -1.7
USP31Q70CQ4 Y_RNA.618-201ENST00000410949 107 ntBASIC4.44□□□□□ -1.7
USP31Q70CQ4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USP31Q70CQ4 AL591043.1-201ENST00000432461 424 ntBASIC4.44□□□□□ -1.7
USP31Q70CQ4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.44□□□□□ -1.7
USP31Q70CQ4 RN7SL863P-201ENST00000462370 296 ntBASIC4.44□□□□□ -1.7
USP31Q70CQ4 AC093852.1-201ENST00000503587 266 ntBASIC4.44□□□□□ -1.7
USP31Q70CQ4 AC097462.2-201ENST00000504623 481 ntBASIC4.44□□□□□ -1.7
USP31Q70CQ4 SNORA70.19-201ENST00000516717 90 ntBASIC4.44□□□□□ -1.7
USP31Q70CQ4 AC091144.1-201ENST00000519573 138 ntBASIC4.44□□□□□ -1.7
USP31Q70CQ4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.44□□□□□ -1.7
USP31Q70CQ4 AC040926.1-201ENST00000530195 238 ntBASIC4.44□□□□□ -1.7
USP31Q70CQ4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.44□□□□□ -1.7
USP31Q70CQ4 H3F3AP1-201ENST00000559984 334 ntBASIC4.44□□□□□ -1.7
USP31Q70CQ4 MIR5188-201ENST00000583467 113 ntBASIC4.44□□□□□ -1.7
USP31Q70CQ4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.44□□□□□ -1.7
USP31Q70CQ4 CUL1P1-201ENST00000509510 2425 ntBASIC4.44□□□□□ -1.7
USP31Q70CQ4 ZNF72P-201ENST00000425869 1908 ntBASIC4.44□□□□□ -1.7
USP31Q70CQ4 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.44□□□□□ -1.7
USP31Q70CQ4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
USP31Q70CQ4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP31Q70CQ4 RNU6-884P-201ENST00000363889 107 ntBASIC4.43□□□□□ -1.7
USP31Q70CQ4 Y_RNA.193-201ENST00000363979 102 ntBASIC4.43□□□□□ -1.7
USP31Q70CQ4 RNY3P11-201ENST00000364153 102 ntBASIC4.43□□□□□ -1.7
USP31Q70CQ4 RNU6-336P-201ENST00000364891 107 ntBASIC4.43□□□□□ -1.7
USP31Q70CQ4 RNU6-898P-201ENST00000365627 104 ntBASIC4.43□□□□□ -1.7
USP31Q70CQ4 SET-203ENST00000372688 801 ntTSL 2 BASIC4.43□□□□□ -1.7
USP31Q70CQ4 SAR1AP2-201ENST00000392696 594 ntBASIC4.43□□□□□ -1.7
USP31Q70CQ4 MIR1252-201ENST00000408861 65 ntBASIC4.43□□□□□ -1.7
USP31Q70CQ4 MTCO3P19-201ENST00000415864 321 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms