Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 RNU6-165P-201ENST00000517170 99 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 NRON-201ENST00000517270 370 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 AC136628.3-201ENST00000521868 290 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 RAB11AP2-201ENST00000545905 639 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 AP000403.1-201ENST00000603349 851 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 AL583856.2-201ENST00000606298 543 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 AL022345.2-201ENST00000606307 135 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 AC092953.2-201ENST00000608000 699 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 RPL21P47-201ENST00000483696 477 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 RNU6-581P-201ENST00000516214 105 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 AC093249.1-201ENST00000567049 203 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 MIR548AX-201ENST00000580117 73 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 MIR4645-201ENST00000583158 77 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 AL162730.1-201ENST00000605734 292 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 AL022345.1-201ENST00000607292 135 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.16□□□□□ -2.38
CSPG4Q6UVK1 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.15□□□□□ -2.38
CSPG4Q6UVK1 RNU6-968P-201ENST00000384076 107 ntBASIC0.15□□□□□ -2.38
CSPG4Q6UVK1 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.15□□□□□ -2.38
CSPG4Q6UVK1 C1DP1-201ENST00000426049 402 ntBASIC0.15□□□□□ -2.38
CSPG4Q6UVK1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.15□□□□□ -2.38
CSPG4Q6UVK1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.15□□□□□ -2.38
CSPG4Q6UVK1 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.15□□□□□ -2.38
CSPG4Q6UVK1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.15□□□□□ -2.38
CSPG4Q6UVK1 RPL31P3-201ENST00000458430 332 ntBASIC0.15□□□□□ -2.38
CSPG4Q6UVK1 ZNF705CP-201ENST00000530515 889 ntBASIC0.15□□□□□ -2.38
CSPG4Q6UVK1 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.15□□□□□ -2.38
CSPG4Q6UVK1 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.15□□□□□ -2.38
CSPG4Q6UVK1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.15□□□□□ -2.38
CSPG4Q6UVK1 AL158211.1-201ENST00000566763 763 ntBASIC0.15□□□□□ -2.38
CSPG4Q6UVK1 MIR5093-201ENST00000583199 100 ntBASIC0.15□□□□□ -2.38
CSPG4Q6UVK1 MIR4768-201ENST00000585270 74 ntBASIC0.15□□□□□ -2.38
CSPG4Q6UVK1 AC016542.1-201ENST00000608259 493 ntBASIC0.15□□□□□ -2.38
CSPG4Q6UVK1 AC024581.2-201ENST00000619986 252 ntBASIC0.15□□□□□ -2.38
CSPG4Q6UVK1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.15□□□□□ -2.38
CSPG4Q6UVK1 FARSBP1-201ENST00000435808 1778 ntBASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 SNORD118-201ENST00000363593 134 ntBASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 RNU6-1237P-201ENST00000384777 107 ntBASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 MIR649-201ENST00000384843 97 ntBASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 MIR10B-201ENST00000385011 110 ntBASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 MIR518D-201ENST00000385014 87 ntBASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 SNRPEP9-201ENST00000436794 238 ntBASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 NDUFB4P10-201ENST00000452541 359 ntBASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 HMGN3P1-201ENST00000453847 193 ntBASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 RAP1BP2-201ENST00000478270 544 ntBASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 AC002350.1-201ENST00000490759 375 ntBASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 AC117525.1-201ENST00000515228 503 ntBASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 SNORA25.11-201ENST00000515935 105 ntBASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 AP003392.2-201ENST00000527269 208 ntBASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 Z83818.1-201ENST00000603584 150 ntBASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 AL133445.2-201ENST00000611191 527 ntBASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 U1.36-201ENST00000620684 176 ntBASIC0.15□□□□□ -2.39
CSPG4Q6UVK1 SNORD3E-201ENST00000362899 217 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 SNORA25B-201ENST00000365507 128 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 RNU6-46P-201ENST00000383860 107 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 MIR214-201ENST00000385214 110 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 AC092634.6-201ENST00000418558 192 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 AC139712.2-201ENST00000424302 339 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 UBE2V1P4-201ENST00000425374 344 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 RPL36AP53-201ENST00000432891 316 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 RAB11AP1-201ENST00000442978 646 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 MTCO3P2-201ENST00000457365 171 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 RNA5SP269-201ENST00000459032 137 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 RNA5SP255-201ENST00000516370 107 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 AL590705.4-201ENST00000532209 134 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 AC079610.2-201ENST00000604818 690 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 MTCO1P18-201ENST00000455518 1419 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 RNU5A-1-201ENST00000362698 116 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 RNU6-833P-201ENST00000363486 107 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 SNORA29-201ENST00000384183 140 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 MIR1207-201ENST00000408249 87 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 AL451054.2-201ENST00000420896 202 ntBASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.14□□□□□ -2.39
CSPG4Q6UVK1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms