Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 AC023141.4-201ENST00000412031 328 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 RPL21P90-201ENST00000415692 466 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 AL592045.1-201ENST00000429867 352 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 RPS3AP52-201ENST00000435639 297 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 Y_RNA.632-201ENST00000459189 102 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 AC008571.1-201ENST00000467232 300 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 AC087884.1-201ENST00000469738 328 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 MTND4P17-201ENST00000470444 350 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 AC117503.1-201ENST00000472241 394 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 RPS15AP34-201ENST00000487776 387 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 TBCAP3-201ENST00000512475 312 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 Y_RNA.682-201ENST00000516457 100 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 SCARNA13-201ENST00000516672 275 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 RNA5SP454-201ENST00000517231 127 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 CYCSP27-201ENST00000527643 293 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 MIR1273C-201ENST00000578669 77 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 AC023043.2-201ENST00000589678 1026 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 AC023043.3-201ENST00000593113 385 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 AC073539.2-201ENST00000597113 165 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 AC024153.1-201ENST00000603103 365 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 AC007742.2-201ENST00000618226 398 ntBASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SNAI3Q3KNW1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 MTND4P23-201ENST00000447723 1363 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 Y_RNA.135-201ENST00000363439 95 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 SNORD116-11-201ENST00000383882 92 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 Y_RNA.384-201ENST00000383909 102 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 RNU1-109P-201ENST00000383960 147 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 Y_RNA.419-201ENST00000384041 102 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 MIR301A-201ENST00000385261 86 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 UBA52P6-201ENST00000399822 382 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 AL513043.1-201ENST00000439124 535 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 RPL32P28-201ENST00000443577 397 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 AC007677.1-201ENST00000445757 515 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 FABP5P15-201ENST00000453566 214 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 SNORA74D-201ENST00000516404 141 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 RNU6-1153P-201ENST00000516760 105 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 RNU6-826P-201ENST00000516827 104 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 RNU6-143P-201ENST00000516942 93 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 RNA5SP165-201ENST00000517142 115 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 SNORA25.17-201ENST00000517184 124 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 RNU6-1315P-201ENST00000517187 99 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 COPS8P3-201ENST00000526024 482 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 CBX3P7-201ENST00000532876 502 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 ANP32BP3-201ENST00000559213 706 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 MIR5692A1-201ENST00000580523 69 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 MIR548AC-201ENST00000585049 88 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 ZNF861P-201ENST00000588126 639 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 AC005046.1-201ENST00000608515 625 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 AL138726.1-201ENST00000614873 333 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 AL160413.1-201ENST00000622780 310 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 AL512643.1-201ENST00000635735 524 ntBASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.42□□□□□ -2.02
SNAI3Q3KNW1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 RNU6-1303P-201ENST00000364841 107 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 SNORA70.4-201ENST00000365509 134 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 Y_RNA.431-201ENST00000384086 102 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 SNORA18.3-201ENST00000384122 132 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 SNORA44-201ENST00000384584 132 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 MIR548F5-201ENST00000408421 86 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 RN7SKP158-201ENST00000410453 326 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 RNU4-14P-201ENST00000410858 122 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 RNU6-607P-201ENST00000411283 108 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 AC074085.1-201ENST00000413598 418 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms