Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MIR4529-201ENST00000578110 78 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 AC245014.2-201ENST00000603689 287 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 AC246785.4-201ENST00000605374 287 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 HSPA8P4-201ENST00000511877 1920 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 RNA5SP160-201ENST00000364866 120 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 RNU6-1179P-201ENST00000384667 107 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 MIR578-201ENST00000384828 96 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 MIR147B-201ENST00000390185 80 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 RNU6-482P-201ENST00000391068 107 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 RNU2-9P-201ENST00000410194 145 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 AL031779.1-201ENST00000415663 330 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 MORF4L1P6-201ENST00000418771 268 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 FABP5P14-201ENST00000437273 393 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 RPL7P12-201ENST00000446719 750 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 AL031659.1-201ENST00000447075 539 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 BTF3P15-201ENST00000455606 336 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 CYP2C59P-201ENST00000457790 269 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 RPS29P15-201ENST00000458329 171 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 AC104435.1-201ENST00000483483 166 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 AC011005.2-201ENST00000487324 359 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 RPL23AP63-201ENST00000498752 471 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 AC116655.1-201ENST00000508324 901 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 AC112206.3-201ENST00000514578 389 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 RNU6-430P-201ENST00000517078 107 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 AC008121.1-201ENST00000603244 268 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 AP001486.3-201ENST00000615334 372 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 AC091932.3-201ENST00000624223 323 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 U6.114-201ENST00000636407 96 ntBASIC2.34□□□□□ -2.03
SHROOM1Q2M3G4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.34□□□□□ -2.04
SHROOM1Q2M3G4 AL390237.1-201ENST00000404226 1415 ntBASIC2.34□□□□□ -2.04
SHROOM1Q2M3G4 KPNA2P1-201ENST00000458289 1591 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 Y_RNA.77-201ENST00000362962 107 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 RNU1-17P-201ENST00000363022 152 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 SNORD115-7-201ENST00000365306 82 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 RNU6-395P-201ENST00000365662 106 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 SNORD116-9-201ENST00000384000 95 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 RNU6-74P-201ENST00000384235 107 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 SNORD116-3-201ENST00000384287 95 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 SNORD116-7-201ENST00000384404 95 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 SNORD116-5-201ENST00000384462 95 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 MIR17-201ENST00000385012 84 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 SNORA17.3-201ENST00000391159 129 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 RPL21P90-201ENST00000415692 466 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 AC004383.1-201ENST00000438135 289 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 C1DP4-201ENST00000455429 424 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 RPL31P3-201ENST00000458430 332 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 AP001324.2-201ENST00000461163 319 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 AC023194.1-201ENST00000493084 308 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 MIR548AC-201ENST00000585049 88 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 AL109809.4-201ENST00000603520 2185 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 AC005336.3-201ENST00000623833 2679 ntBASIC2.33□□□□□ -2.04
SHROOM1Q2M3G4 RNU6-858P-201ENST00000362436 107 ntBASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 RNU2-20P-201ENST00000410425 191 ntBASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 PIGFP2-201ENST00000421400 651 ntBASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 PGBD4P6-201ENST00000421501 610 ntBASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 PTGES3P4-201ENST00000426243 356 ntBASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 AC133104.1-201ENST00000429100 218 ntBASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 RPL7P54-201ENST00000438336 674 ntBASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 AC090255.1-201ENST00000495779 349 ntBASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 AC087241.2-201ENST00000535801 324 ntBASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 SUB1P2-201ENST00000556401 297 ntBASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 AC092325.1-201ENST00000566449 554 ntBASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 MIR6134-201ENST00000617606 109 ntBASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 AC072046.2-201ENST00000618366 268 ntBASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 AC136475.10-201ENST00000620253 385 ntBASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 AC011155.2-201ENST00000623202 216 ntBASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
SHROOM1Q2M3G4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 RNU6-1287P-201ENST00000362914 107 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms