Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 RN7SKP284-201ENST00000411002 343 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 MTCYBP5-201ENST00000423752 1135 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.33□□□□□ -2.2
SSX1Q16384 AC007283.2-201ENST00000424739 197 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 AC137499.1-201ENST00000427602 88 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.33□□□□□ -2.2
SSX1Q16384 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.33□□□□□ -2.2
SSX1Q16384 AL590365.1-201ENST00000450788 243 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.33□□□□□ -2.2
SSX1Q16384 RPS29P21-201ENST00000496272 170 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 AF131216.2-201ENST00000512316 564 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.33□□□□□ -2.2
SSX1Q16384 GNAI2P1-201ENST00000541815 315 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.33□□□□□ -2.2
SSX1Q16384 AL354943.1-201ENST00000572103 781 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.33□□□□□ -2.2
SSX1Q16384 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.33□□□□□ -2.2
SSX1Q16384 AL670379.2-201ENST00000604983 252 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 AL670379.4-201ENST00000605279 254 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 AL139286.2-201ENST00000606838 396 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 RNU6-87P-201ENST00000607561 108 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.33□□□□□ -2.2
SSX1Q16384 MIR8081-201ENST00000611533 95 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 AC092140.2-201ENST00000618027 521 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 AC092192.1-201ENST00000633154 1018 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 MTND4P23-201ENST00000447723 1363 ntBASIC1.33□□□□□ -2.2
SSX1Q16384 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SSX1Q16384 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SSX1Q16384 RNU6-212P-201ENST00000362642 104 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 RNU6-501P-201ENST00000364072 100 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 MIR517C-201ENST00000385103 95 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
SSX1Q16384 SNORA40.18-201ENST00000391200 128 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 RPS3AP36-201ENST00000398190 775 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 MIR1323-201ENST00000408090 73 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 RN7SKP51-201ENST00000410781 304 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 SRIP3-201ENST00000413200 219 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.32□□□□□ -2.2
SSX1Q16384 UBE2V1P4-201ENST00000425374 344 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 AL365184.2-201ENST00000431139 435 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 AL365400.1-201ENST00000431854 640 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 MTND5P2-201ENST00000442927 1142 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 AL360271.2-201ENST00000447710 161 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 AC021146.2-201ENST00000504736 556 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.32□□□□□ -2.2
SSX1Q16384 RNU6-965P-201ENST00000516721 96 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 AP005597.4-201ENST00000526762 229 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.32□□□□□ -2.2
SSX1Q16384 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 PCMTD1P2-201ENST00000565017 355 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 MIR5697-201ENST00000578045 78 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 MIR3683-201ENST00000580847 82 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 AC012065.4-201ENST00000602445 679 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 AC078795.2-201ENST00000602835 1252 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 AL353778.1-201ENST00000603149 408 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 AC091834.1-201ENST00000614543 472 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 AL159153.1-201ENST00000619688 317 ntBASIC1.32□□□□□ -2.2
SSX1Q16384 AC006026.1-201ENST00000444025 1803 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.31□□□□□ -2.2
SSX1Q16384 snoU2_19.1-201ENST00000362361 80 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 RNU1-58P-201ENST00000362413 163 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 RNU5F-6P-201ENST00000362979 116 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 RNU6-371P-201ENST00000364283 108 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 SNORA24.1-201ENST00000384401 135 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 MIR29B2-201ENST00000385055 81 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 U8.13-201ENST00000390842 128 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 SNORA26.9-201ENST00000391322 122 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 MTCYBP36-201ENST00000404146 440 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 RNA5SP501-201ENST00000410990 112 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 AC009310.1-201ENST00000414414 451 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 AC098592.1-201ENST00000419352 333 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.31□□□□□ -2.2
SSX1Q16384 HSFY7P-201ENST00000432672 318 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 AC119618.1-201ENST00000434191 222 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.31□□□□□ -2.2
SSX1Q16384 HSFY8P-201ENST00000437934 318 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 FDX1P2-201ENST00000450769 375 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.31□□□□□ -2.2
SSX1Q16384 HSFY5P-201ENST00000453726 309 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 AC006026.2-201ENST00000457376 180 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 RPL30P12-201ENST00000474666 353 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.31□□□□□ -2.2
SSX1Q16384 Y_RNA.675-201ENST00000516389 149 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 AP005660.1-201ENST00000522972 293 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.31□□□□□ -2.2
SSX1Q16384 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.31□□□□□ -2.2
SSX1Q16384 AL359999.1-201ENST00000604513 294 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 BX248123.2-201ENST00000606318 124 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.31□□□□□ -2.2
SSX1Q16384 TUSC7.1-201ENST00000610969 165 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 RMST_7.1-201ENST00000621935 268 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 AC007792.1-201ENST00000623023 402 ntBASIC1.31□□□□□ -2.2
SSX1Q16384 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
SSX1Q16384 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SSX1Q16384 WWP1P1-201ENST00000466609 2769 ntBASIC1.3□□□□□ -2.2
SSX1Q16384 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SSX1Q16384 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms